code-review

Workflow runs for code-review

• Bump certifi from 2025.11.12 to 2026.10.19 in /requirements

  skipped:
  code-review#43:Pull request#463labeledbydependabot[bot]Bot
  dependabot/pip/requirements/certifi-2026.10.19

  Oct 26, 20261s
  More actions for workflow run 43

• Bump certifi from 2025.11.12 to 2026.10.19 in /requirements

  skipped:
  code-review#42:Pull request#463labeledbydependabot[bot]Bot
  dependabot/pip/requirements/certifi-2026.10.19

  Oct 26, 20267s
  More actions for workflow run 42

• [fix] Datatype inference in psm_reader _load_file

  skipped:
  code-review#41:Pull request#451labeledbylucas-diedrich
  fix/psm-nan-handling-1

  Sep 14, 20261s
  More actions for workflow run 41

• [fix] Adapt search engine-specific PSM readers to new convention in _load_file

  skipped:
  code-review#40:Pull request#452labeledbylucas-diedrich
  fix/psm-nan-handling-2_adapt-reader

  Sep 14, 20268s
  More actions for workflow run 40

• [fix] Spectronaut Reader - Column Mapping

  skipped:
  code-review#39:Pull request#450labeledbylucas-diedrich
  fix/spectronaut-reader

  Sep 14, 20261s
  More actions for workflow run 39

• Abandon py 38

  skipped:
  code-review#38:Pull request#442labeledbymschwoer
  abandon_py_38

  Aug 31, 20267s
  More actions for workflow run 38

• Bump python version due to biopython pin clash

  skipped:
  code-review#37:Pull request#431labeledbylucas-diedrich
  fix/bump-python-version

  Aug 31, 20261s
  More actions for workflow run 37

• Bump python version due to biopython pin clash

  skipped:
  code-review#36:Pull request#431labeledbylucas-diedrich
  fix/bump-python-version

  Aug 31, 20261s
  More actions for workflow run 36

• [feature] Add Zenodo file record downloader

  skipped:
  code-review#35:Pull request#430labeledbylucas-diedrich
  feature/zenodo-downloads

  Aug 31, 20261s
  More actions for workflow run 35

• Proteome Discoverer Reader

  skipped:
  code-review#33:Pull request#411labeledbylucas-diedrich
  feature/proteome-discoverer-pg-reader

  May 6, 20261s
  More actions for workflow run 33

• [Fix] Fix incorrect pytest skip usage that raises in error in pytest>9

  skipped:
  code-review#32:Pull request#401labeledbylucas-diedrich
  fix-pg-integration-test

  Jan 26, 20261s
  More actions for workflow run 32

• [Dep] Get rid of cgi dependency (removed from standard library in 3.13)

  skipped:
  code-review#31:Pull request#400labeledbylucas-diedrich
  remove-cgi-dep

  Jan 26, 20262s
  More actions for workflow run 31

• Peaks reader

  skipped:
  code-review#30:Pull request#397labeledbylucas-diedrich
  peaks_reader

  Jan 19, 2026Skipped
  More actions for workflow run 30

• Ax 989 remove quant readers

  skipped:
  code-review#29:Pull request#392labeledbylucas-diedrich
  AX-989-remove-quant-readers

  Jan 12, 20261s
  More actions for workflow run 29

• Adapt scverse tutorial to alphadia v2.0.0

  skipped:
  code-review#28:Pull request#370labeledbylucas-diedrich
  update-scverse-tutorial

  Nov 25, 20251s
  More actions for workflow run 28

• alphaDIA v2.0.0 PSM table support

  skipped:
  code-review#27:Pull request#369labeledbylucas-diedrich
  alphadia-v2-psm-reader

  Nov 25, 20251s
  More actions for workflow run 27

• Alphadia precursor ID support

  skipped:
  code-review#26:Pull request#368labeledbylucas-diedrich
  alphadia-precursor-id

  Nov 25, 20251s
  More actions for workflow run 26

• directLFQ protein group reader

  skipped:
  code-review#25:Pull request#365labeledbylucas-diedrich
  directlfq-pg-reader

  Oct 30, 20251s
  More actions for workflow run 25

• Support multi-level aggregation 3 | Add configuration of new keys for DIANN

  skipped:
  code-review#24:Pull request#362labeledbylucas-diedrich
  add-psm-column-mappings

  Oct 29, 20251s
  More actions for workflow run 24

• Support multi-level aggregation 3 | Add configuration of new keys for DIANN

  skipped:
  code-review#23:Pull request#362labeledbylucas-diedrich
  add-psm-column-mappings

  Oct 29, 20251s
  More actions for workflow run 23

• Support multi-level aggregation 2 | Add missing column keys

  skipped:
  code-review#22:Pull request#361labeledbylucas-diedrich
  add-missing-psm-keys

  Oct 29, 20251s
  More actions for workflow run 22

• Support multi-level aggregation 1 | Streamline definition of PsmDfCols keys

  skipped:
  code-review#21:Pull request#359labeledbylucas-diedrich
  streamline-psm-col-definition

  Oct 29, 20252s
  More actions for workflow run 21

• Fix PG reader nan handling

  skipped:
  code-review#20:Pull request#351labeledbylucas-diedrich
  fix-pg-reader-nan

  Sep 27, 20251s
  More actions for workflow run 20