Cache conda packages weekly #8
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| # Cache .snakemake/conda each sunday / monday night | |
| --- | |
| name: Cache conda packages weekly | |
| on: # yamllint disable-line rule:truthy | |
| schedule: | |
| - cron: '0 0 * * 1' | |
| workflow_dispatch: | |
| env: | |
| CACHE_NUMBER: 0 # Increment this number to invalidate the cache | |
| jobs: | |
| weekly-cache: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| with: | |
| lfs: 'true' | |
| - name: Set up cache | |
| uses: actions/cache@v4 | |
| with: | |
| path: | | |
| .snakemake/conda | |
| ~/.cache/pre-commit/ | |
| key: snakemake-conda-${{ env.CACHE_NUMBER }} | |
| id: cache | |
| - name: Download environments | |
| uses: snakemake/[email protected] | |
| with: | |
| directory: . | |
| snakefile: workflow/Snakefile | |
| args: > | |
| --use-conda | |
| --conda-create-envs-only | |
| --conda-frontend mamba | |
| --cores 1 |