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galaxyproject / tools-iuc Public

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IRMA: Edited config for plattform specific assembly#6705

Merged

wm75 merged 11 commits intogalaxyproject:maingalaxyproject/tools-iuc:mainfrom aaronKol:irma_edit_configaaronKol/tools-iuc:irma_edit_configCopy head branch name to clipboard

Jan 29, 2025

+6,757-8,079

Conversation Commits11 (11)Checks Files changed

Commits

Commits on Jan 27, 2025

Edited config for plattform specific assembly
aaronKol
committed
Reduced test file sizes
aaronKol
committed
Fixed test data not matching plattform
aaronKol
committed
Test, if CI tests failing depends on LABEL
aaronKol
committed
Removed wrong requirement line
aaronKol
committed

Commits on Jan 28, 2025

Add zip+coreutilites for LABEL in docker
aaronKol
committed
Added awk & sed requirement
aaronKol
committed
Back to only using BLAT for sorting
aaronKol
committed
Added short read parameters for minimap2, prevent them from being overwritten by IRMA
aaronKol
committed
Renamed assembly variables. ssw -> mmm2
aaronKol
committed
Add sr preset for Illumina also to advanced settings
wm75
committed

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