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edwardlavender

Update thesis citation

Aug 29, 2023

96ba9c9 · Aug 29, 2023

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Name		Name	Last commit message	Last commit date
parent directory ..
ac.Rd		ac.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
acdc.Rd		acdc.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
acdc_access.Rd		acdc_access.Rd	Add new acdc_access_*() functions.	Aug 22, 2021
acdc_animate_record.Rd		acdc_animate_record.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
acdc_archive-class.Rd		acdc_archive-class.Rd	Update centroid -> container terminology and update example datasets …	May 28, 2022
acdc_plot_record.Rd		acdc_plot_record.Rd	Fix addition of containers in acdc_plot_record()	Aug 29, 2023
acdc_plot_trace.Rd		acdc_plot_trace.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
acdc_record-class.Rd		acdc_record-class.Rd	Continue acdc* documentation updates.	May 28, 2022
acdc_simplify.Rd		acdc_simplify.Rd	Continue acdc* documentation updates.	May 28, 2022
acs_setup_containers.Rd		acs_setup_containers.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
acs_setup_detection_kernels.Rd		acs_setup_detection_kernels.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
acs_setup_mobility.Rd		acs_setup_mobility.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
assemble_sentinel_counts.Rd		assemble_sentinel_counts.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
buffer_and_crop.Rd		buffer_and_crop.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
cells_from_val.Rd		cells_from_val.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
check....Rd		check....Rd	Fix backwards ' issue in pdf (LaTeX) manual.	Feb 2, 2021
check_class.Rd		check_class.Rd	Fix backwards ' issue in pdf (LaTeX) manual.	Feb 2, 2021
check_class_acdc_record.Rd		check_class_acdc_record.Rd	Restructure acdc_ and pf_ .R script files for easier editing.	Aug 21, 2021
check_crs.Rd		check_crs.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
check_dir.Rd		check_dir.Rd	Fix backwards ' issue in pdf (LaTeX) manual.	Feb 2, 2021
check_named_list.Rd		check_named_list.Rd	Fix backwards ' issue in pdf (LaTeX) manual.	Feb 2, 2021
check_names.Rd		check_names.Rd	Fix backwards ' issue in pdf (LaTeX) manual.	Feb 2, 2021
check_tz.Rd		check_tz.Rd	Fix backwards ' issue in pdf (LaTeX) manual.	Feb 2, 2021
check_value.Rd		check_value.Rd	Fix backwards ' issue in pdf (LaTeX) manual.	Feb 2, 2021
cl.Rd		cl.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
coa.Rd		coa.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
coa_setup_delta_t.Rd		coa_setup_delta_t.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
compact.Rd		compact.Rd	Remove reliance on 'plyr' and fix minor typos.	Jul 12, 2021
crop_from_click.Rd		crop_from_click.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
dat_acdc.Rd		dat_acdc.Rd	Update acdc-classes: in ACDC function outputs, .acdc elememts are ter…	Aug 21, 2021
dat_acoustics.Rd		dat_acoustics.Rd	Update thesis citation	Aug 29, 2023
dat_archival.Rd		dat_archival.Rd	Update thesis citation	Aug 29, 2023
dat_coast.Rd		dat_coast.Rd	Update documentation (dats).	Jan 30, 2021
dat_containers.Rd		dat_containers.Rd	Update centroid -> container terminology and update example datasets …	May 28, 2022
dat_dc.Rd		dat_dc.Rd	Update acdc-classes: in ACDC function outputs, .acdc elememts are ter…	Aug 21, 2021
dat_dcpf_histories.Rd		dat_dcpf_histories.Rd	Update pf-classes. pf() returns 'pf_archive' class object; pf_plot_hi…	Aug 21, 2021
dat_dcpf_paths.Rd		dat_dcpf_paths.Rd	Update pf-classes. pf() returns 'pf_archive' class object; pf_plot_hi…	Aug 21, 2021
dat_gebco.Rd		dat_gebco.Rd	Add setup_acdc() function, as well as new datasets for the coastline …	Dec 21, 2020
dat_ids.Rd		dat_ids.Rd	Update thesis citation	Aug 29, 2023
dat_moorings.Rd		dat_moorings.Rd	Update thesis citation	Aug 29, 2023
dat_sentinel.Rd		dat_sentinel.Rd	Update thesis citation	Aug 29, 2023
dc.Rd		dc.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
dcq.Rd		dcq.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
dist_btw_clicks.Rd		dist_btw_clicks.Rd	Add process_surface() and dist_btw_clicks() functions.	Mar 31, 2021
dist_btw_points_3d.Rd		dist_btw_points_3d.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
dist_btw_receivers.Rd		dist_btw_receivers.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
dist_over_surface.Rd		dist_over_surface.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
dot-acs.Rd		dot-acs.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
dot-acs_pl.Rd		dot-acs_pl.Rd	Update centroid -> container terminology and update example datasets …	May 28, 2022
dot-planedist2.Rd		dot-planedist2.Rd	Further develop pf_simplify() with streamlined distance calculations …	Nov 22, 2021
eval_by_kud.Rd		eval_by_kud.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
flapper-tips-parallel.Rd		flapper-tips-parallel.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
flapper.Rd		flapper.Rd	Update package description.	May 28, 2022
flapper_opts.Rd		flapper_opts.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
get_detection_area_sum.Rd		get_detection_area_sum.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
get_detection_area_ts.Rd		get_detection_area_ts.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
get_detection_clumps.Rd		get_detection_clumps.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
get_detection_containers.Rd		get_detection_containers.Rd	Resolve (new) issue with data slot in SpatialPointsDataFrame	Aug 27, 2023
get_detection_containers_envir.Rd		get_detection_containers_envir.Rd	Resolve (new) issue with data slot in SpatialPointsDataFrame	Aug 27, 2023
get_detection_containers_overlap.Rd		get_detection_containers_overlap.Rd	Resolve (new) issue with data slot in SpatialPointsDataFrame	Aug 27, 2023
get_detection_days.Rd		get_detection_days.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
get_detection_overlaps.Rd		get_detection_overlaps.Rd	Resolve (new) issue with data slot in SpatialPointsDataFrame	Aug 27, 2023
get_detection_pr.Rd		get_detection_pr.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
get_hr.Rd		get_hr.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
get_id_rec_overlap.Rd		get_id_rec_overlap.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
get_intersection.Rd		get_intersection.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
get_mvt_mobility.Rd		get_mvt_mobility.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
get_mvt_resting.Rd		get_mvt_resting.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
get_n_operational_ts.Rd		get_n_operational_ts.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
get_residents.Rd		get_residents.Rd	Fix dash in get_residents() (causing manual build error), guided by c…	Sep 8, 2022
invert_poly.Rd		invert_poly.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
kud_around_coastline.Rd		kud_around_coastline.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
kud_habitat.Rd		kud_habitat.Rd	Add new helper functions (kud_habitat(), pf_access_history(), xy_from…	Sep 14, 2021
lcp_comp.Rd		lcp_comp.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
lcp_costs.Rd		lcp_costs.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
lcp_from_point.Rd		lcp_from_point.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
lcp_graph_surface.Rd		lcp_graph_surface.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
lcp_interp.Rd		lcp_interp.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
lcp_over_surface.Rd		lcp_over_surface.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
make_df_detections.Rd		make_df_detections.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
make_matrix_cooccurence.Rd		make_matrix_cooccurence.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
make_matrix_detections.Rd		make_matrix_detections.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
make_matrix_ids.Rd		make_matrix_ids.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
make_matrix_receivers.Rd		make_matrix_receivers.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
mask_io.Rd		mask_io.Rd	Add mask_io() function.	Dec 22, 2020
pf.Rd		pf.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
pf_access_history.Rd		pf_access_history.Rd	Add pf_access_distance_matrix() function.	Nov 16, 2021
pf_access_history_files.Rd		pf_access_history_files.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
pf_access_particles_unique.Rd		pf_access_particles_unique.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
pf_animate_history.Rd		pf_animate_history.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
pf_archive-class.Rd		pf_archive-class.Rd	Modify implementation of summarise_pr in pf_simplify() to account for…	Sep 13, 2021
pf_kud.Rd		pf_kud.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
pf_kud_.Rd		pf_kud_.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
pf_loglik.Rd		pf_loglik.Rd	Use log-probability terminology for paths.	May 28, 2022
pf_path-class.Rd		pf_path-class.Rd	Update routines for examining 'probability of use' from particle hist…	Aug 26, 2021
pf_plot_1d.Rd		pf_plot_1d.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
pf_plot_2d.Rd		pf_plot_2d.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
pf_plot_3d.Rd		pf_plot_3d.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
pf_plot_history.Rd		pf_plot_history.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
pf_plot_map.Rd		pf_plot_map.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
pf_setup_movement_pr.Rd		pf_setup_movement_pr.Rd	Restructure acdc_ and pf_ .R script files for easier editing.	Aug 21, 2021
pf_setup_optimisers.Rd		pf_setup_optimisers.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
pf_setup_record.Rd		pf_setup_record.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
pf_simplify.Rd		pf_simplify.Rd	Fix typo in documentation for pf_simplify()	Aug 29, 2023
pipe.Rd		pipe.Rd	Add assemble_sentinel_counts() function.	Jun 22, 2020
process_false_detections_sf.Rd		process_false_detections_sf.Rd	Fix new issue in process_false_detections_sf() example	Aug 29, 2023
process_quality_check.Rd		process_quality_check.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
process_receiver_id.Rd		process_receiver_id.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
process_surface.Rd		process_surface.Rd	Unify parallelisation approaches: new cl_*() functions to faciliate t…	Dec 2, 2021
query_open_topo.Rd		query_open_topo.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
round_any.Rd		round_any.Rd	Remove reliance on 'plyr' and fix minor typos.	Jul 12, 2021
segments_cross_barrier.Rd		segments_cross_barrier.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
sim_array.Rd		sim_array.Rd	Fix package name typo	Aug 28, 2023
sim_detections.Rd		sim_detections.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
sim_path_-times.Rd		sim_path_-times.Rd	Update documentation (continued).	Feb 1, 2021
sim_path_ou_1.Rd		sim_path_ou_1.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
sim_path_sa.Rd		sim_path_sa.Rd	Permit RasterLayers in sim_array() and sim_path_sa() to support simul…	Aug 28, 2023
sim_surface.Rd		sim_surface.Rd	Use tidy style (via usethis::use_tidy_style())	Mar 14, 2023
split_raster_equally.Rd		split_raster_equally.Rd	Remove reliance on 'plyr' and fix minor typos.	Jul 12, 2021
summarise_along_walk.Rd		summarise_along_walk.Rd	Update sim_detections() to aggregate detections over delta_t, if requ…	Jan 5, 2021
update_extent.Rd		update_extent.Rd	Support Spatial* objects in update_extent()	Aug 28, 2023
xy_from_click.Rd		xy_from_click.Rd	Add new helper functions (kud_habitat(), pf_access_history(), xy_from…	Sep 14, 2021
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