Discussions

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  In the airway.mk file I removed the "~/" from the refs/ path to create a refs directory locally in the current working folder

  njbowen started Apr 24, 2024 in General · Closed

  

  

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  this command should be with "--" not "-" seqkit fx2tab –name –only-id –gc viral*.fna.gz | head

  bowen-cau started Feb 27, 2025 in General · Closed

  

  

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  Installation environment updated to Python 3.12

  ialbert announced May 1, 2025 in Announcements

  

  

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  Error installing seqret formula (M3 mac)

  AceM1188 started Aug 1, 2024 in General · Closed

  

  

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  doctor.py gives errors

  ronish-droid started Mar 23, 2025 in General · Closed

  

  

  

  

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  Can't find packages like datamash or samtools when installing on M1 in arm64 conda

  kaysagit asked Nov 21, 2024 in Q&A · Closed · Unanswered

  

  

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  Issue with installing Biostar handbook

  arroyo-lopez-mc asked Nov 3, 2024 in Q&A · Closed · Unanswered

  

  

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  permission denied issue for installing software in step three： Configuring the shell

  Yuzhou-Arial asked May 21, 2024 in Q&A · Closed · Answered

  

  

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  human variation .mk files

  njbowen asked May 2, 2024 in Q&A · Answered

  

  

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  Issue activating Conda Environment

  danielpy97 asked Apr 26, 2024 in Q&A · Closed · Unanswered

  

  

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  where is this file? src/redo/airway.mk. I don't see a redo folder

  njbowen asked Apr 24, 2024 in Q&A · Answered

  

  

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  src/run/salmon.mk info.json file had to be renamed to refInfo.json

  njbowen started Apr 19, 2024 in General · Closed

  

  

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  in src/r/edger.r i had to change the read.csv command to include the argument check.names = FALSE

  njbowen started Apr 19, 2024 in General

  

  

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  Package Installation Issues, and Certificate Error - Output of Doctor.py

  KBagal123 asked Oct 19, 2023 in Q&A · Unanswered

  

  

  

  

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  this recipe doesn't follow the explanation explained below it in Workflows

  njbowen started Apr 9, 2024 in General · Closed

  

  

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  Spelling and grammatical mistakes

  coltonrobbins73 started Feb 14, 2024 in General

  

  

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  Fixing problems with fastq-dump

  ialbert announced Sep 28, 2022 in Announcements

  

  

  

  

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  IGV and bam files

  gsk7757 asked Feb 6, 2024 in Q&A · Unanswered

  

  

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  Graphic Interpretation of Sequence Duplication

  TullyMonster asked Dec 19, 2023 in Q&A · Unanswered

  

  

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  Chapter Expansion Plan

  TullyMonster started Dec 16, 2023 in General

  

  

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  Error: emineJ

  TullyMonster asked Dec 13, 2023 in Q&A · Answered

  

  

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  Featurecounts

  gsk7757 asked Dec 11, 2023 in Q&A · Unanswered

  

  

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  How to download and install readseq?

  TullyMonster asked Dec 3, 2023 in Q&A · Unanswered

  

  

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  Heatmap

  gsk7757 asked Dec 1, 2023 in Q&A · Unanswered

  

  

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  Difference between edger rscripts in directory "code" to directory "src"

  gsk7757 asked Nov 29, 2023 in Q&A · Unanswered

  

  

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