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it selects by FDR at 0.05, you can override that and apply other filters |
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takes just a bit of R coding and you can even paste my code into the ChatGPT and ask it to give you a line that does what you want |
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When I use the rscript to generate a heatmap, it does generate a heatmap but picks genes from the entire list. May I know how these genes are picked and would it be possible to generate a heatmap for only differentially expressed genes that are up or down-regulated genes by at least 2-fold? Could you please help?
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