GitHub - axondeepseg/data_axondeepseg_sem: SEM dataset for AxonDeepSeg. Example dataset containing scanning electron microscopy (SEM) data to illustrate BIDS convention.

axondeepseg / data_axondeepseg_sem Public

Notifications You must be signed in to change notification settings
Fork 0
Star 2

SEM dataset for AxonDeepSeg. Example dataset containing scanning electron microscopy (SEM) data to illustrate BIDS convention.

MIT license

2 stars 0 forks Branches Tags Activity

Star

Notifications

Branches Tags

Name		Name	Last commit message	Last commit date
Latest commit History 10 Commits
derivatives/labels		derivatives/labels
sub-rat1/micr		sub-rat1/micr
sub-rat2/micr		sub-rat2/micr
sub-rat3/micr		sub-rat3/micr
sub-rat4/micr		sub-rat4/micr
sub-rat5/micr		sub-rat5/micr
sub-rat6/micr		sub-rat6/micr
sub-rat7/micr		sub-rat7/micr
sub-rat8/micr		sub-rat8/micr
.gitignore		.gitignore
LICENSE		LICENSE
README		README
dataset_description.json		dataset_description.json
participants.json		participants.json
participants.tsv		participants.tsv
samples.json		samples.json
samples.tsv		samples.tsv

Repository files navigation

# data_axondeepseg_sem

SEM dataset for AxonDeepSeg (https://axondeepseg.readthedocs.io/)
10 rat spinal cord samples with axon and myelin manual segmentation labels. This dataset comprises acquisitions conducted by various researchers between 2015 and 2017. The images represent small cropped sections extracted from larger mosaic images.

Example dataset containing scanning electron microscopy (SEM) data to illustrate BIDS convention.
BIDS version 1.7.0