Biomarker_Code

Biomarker_Code

Data Element Concept

Attribute	Value
ObjectClass	Biomarker
ObjectProperty	Code
DataElementConcept	Biomarker_Code
ObjectPropertyLabelEN	Code
ObjectPropertyLabelFR	Code du marqueur
DataElementConceptDefEN	Biomarker name
DataElementConceptDefFR	Nom du biomarqueur

Specifications

Attribute	Value
FormatConceptualDomain	String
Required	mandatory if ObjectClass is set

Usage

Attribute	Value
Examples

ConceptualDomain

ValueMeaning	LabelValueMeaning
OSIRIS:C39-1	CKIT
OSIRIS:C39-2	b-catenine
OSIRIS:C39-3	CKIT/DOG1
OSIRIS:C39-4	FOXL2/DICER
OSIRIS:C39-5	ETV6-NTRK3
OSIRIS:C39-6	MYB-NFIB
OSIRIS:C39-7	PDGFRA/FGFR1
OSIRIS:C39-8	MDM2
OSIRIS:C39-9	N-MYC
OSIRIS:C39-10	C-MYC
OSIRIS:C39-11	BCR-ABL1
OSIRIS:C39-12	COL1A1
OSIRIS:C39-13	DDIT3
OSIRIS:C39-14	EWSR2
OSIRIS:C39-15	SYT
OSIRIS:C39-16	CTNNB1
OSIRIS:C39-17	FUS
OSIRIS:C39-18	IGH-BCL2
OSIRIS:C39-19	JAZF1
OSIRIS:C39-20	FOXO1A
OSIRIS:C39-21	TFE3
OSIRIS:C39-22	HPV
OSIRIS:C39-23	Merkell
OSIRIS:C39-24	EBER
OSIRIS:C39-25	PSA
OSIRIS:C39-26	CA125
OSIRIS:C39-27	CA153
OSIRIS:C39-28	CA199
OSIRIS:C39-29	Ki67
OSIRIS:C39-30	Nb mitoses
OSIRIS:C39-31	RO
OSIRIS:C39-32	RP
OSIRIS:C39-33	HER2
OSIRIS:C39-34	PD-L1
OSIRIS:C39-35	AMHR2
OSIRIS:C39-36	P53
OSIRIS:C39-37	BRCA
OSIRIS:C39-38	MSI
OSIRIS:C39-39	CDK12
OSIRIS:C39-40	BRAF
OSIRIS:C39-41	NRAS-KRAS
OSIRIS:C39-42	EGFR
OSIRIS:C39-43	ALK
OSIRIS:C39-44	ROS1
OSIRIS:C39-45	C-MET
OSIRIS:C39-46	ESR1
OSIRIS:C39-47	PAM50
OSIRIS:C39-48	ENDOPREDICT
UMLS:C0518015	Hemoglobin Measurement
UMLS:C0014772	Erythrocyte Count
UMLS:C0023508	Leukocyte Count
UMLS:C0032181	Platelet Count
UMLS:C0948762	Absolute Neutrophil Count
UMLS:C0200635	Lymphocyte Count
UMLS:C0200637	Monocyte Count
UMLS:C0200638	Eosinophil Count
UMLS:C0200641	Total Basophil Count
UMLS:C0337443	Sodium Measurement
UMLS:C0202194	Potassium Measurement
UMLS:C0201925	Calcium Measurement
UMLS:C0201975	Creatinine Measurement
NCI:C150847	Estimated Creatinine Clearance
UMLS:C0201913	Total Bilirubin Measurement
UMLS:C0523826	Phosphate Measurement
UMLS:C0373675	Magnesium Measurement
UMLS:C0201899	Aspartate Aminotransferase Measurement
UMLS:C0201836	Alanine Aminotransferase Measurement
UMLS:C0201838	Albumin Measurement
UMLS:C0033707	Prothrombin Time
UMLS:C0525032	International Normalized Ratio of Prothrombin Time
UMLS:C0030605	Partial Thromboplastin Time