merge for v1.8 update#113

Merged

Bribak merged 33 commits intomasterfrom

Mar 24, 2026

Commits on Feb 16, 2026

reset change log & fix a docs bug with Quarto
Bribak
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Commits on Feb 20, 2026

Commits on Feb 24, 2026

faster network construction
Bribak
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Commits on Feb 25, 2026

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Commits on Feb 27, 2026

annotate_figure fix; get_differential_biosynthesis improvement
Bribak
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Commits on Mar 1, 2026

fix CLR-application for paired data in preprocess_data
Bribak
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Commits on Mar 3, 2026

fix exotic narrow wildcard linkages not being parsed correctly in count_unique_subgraphs_of_size_k
Bribak
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Commits on Mar 5, 2026

made sure duplicate column name suffixes are stripped in glycomics_data_loader
Bribak
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Commits on Mar 6, 2026

make sure motif-level CLR abundances use the motif geometric mean rather than glycan geometric mean
Bribak
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Commits on Mar 10, 2026

Commits on Mar 13, 2026

Commits on Mar 16, 2026

Commits on Mar 17, 2026

Commits on Mar 18, 2026

added new N+O+GSL glycomics data from leukemia cell lines
Bribak
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Commits on Mar 19, 2026

Commits on Mar 23, 2026

Commits on Mar 24, 2026