chore: update pre-commit hooks

[pre-commit-ci]

updates:

• github.com/pre-commit/pre-commit-hooks: v5.0.0 → v6.0.0
• github.com/astral-sh/ruff-pre-commit: v0.11.12 → v0.12.11
• github.com/pre-commit/mirrors-mypy: v1.16.0 → v1.17.1

[codecov]

Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 90.33%. Comparing base (dbcf37b) to head (e52701f).

❌ Your project check has failed because the head coverage (90.33%) is below the target coverage (100.00%). You can increase the head coverage or adjust the target coverage.

❗ There is a different number of reports uploaded between BASE (dbcf37b) and HEAD (e52701f). Click for more details.

HEAD has 5 uploads less than BASE

Flag	BASE (dbcf37b)	HEAD (e52701f)
	15	10

Additional details and impacted files

@@            Coverage Diff             @@
##             main     #762      +/-   ##
==========================================
- Coverage   99.82%   90.33%   -9.49%     
==========================================
  Files          64       64              
  Lines        2804     2804              
==========================================
- Hits         2799     2533     -266     
- Misses          5      271     +266     

see 2 files with indirect coverage changes

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[DimitriPapadopoulos]

Add PT031 to the list of rules of ignore (for now):

numcodecs/pyproject.toml

Lines 201 to 204 in 4fdb625

	"PT001",
	"PT011",
	"PT012",
	"RET505",