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WIP: from_solis parse more metadata #973

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WIP: from_solis parse more metadata #973

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11 changes: 11 additions & 0 deletions WrightTools/data/_solis.py
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Original file line number Diff line number Diff line change
Expand Up @@ -105,6 +105,17 @@ def from_Solis(filepath, name=None, parent=None, verbose=True) -> Data:
else:
xname = "wm"
xunits = "nm"
# is cropped?
if "{left,right,bottom,top}" in data.attrs.keys():
left, right, bottom, top = data.attrs["{left,right,bottom,top}"].split(",")
# in our tests, xindex is retained in the asc file, so screen for change
if "xindex" in data.variable_names and data["xindex"].min() == 0:
xindex = data["xindex"]
xindex += int(left)
if "yindex" in data.variable_names and data["yindex"].min() == 0:
yindex = data["yindex"]
yindex += int(bottom)

data.create_variable(name=xname, values=axis0[:, None], units=xunits)
data.create_variable(name="yindex", values=np.arange(arr.shape[1])[None, :], units=None)
data.transform(data.variables[0].natural_name, "yindex")
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