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bam2msa small softclipping fix #56

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bam2msa small softclipping fix #56

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8f9f93f
Update __init__.py softclip handling
TheGreatJack Nov 28, 2024
7878316
Update __init__.py
TheGreatJack Nov 30, 2024
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2 changes: 1 addition & 1 deletion BioExt/misc/__init__.py
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Original file line number Diff line number Diff line change
Expand Up @@ -345,7 +345,7 @@ def gapless(seq):
raise ValueError('seq must have type SeqRecord, Seq, or str')


_cigar_regexp = re_compile(r'([0-9]+)([M=XID])')
_cigar_regexp = re_compile(r'([0-9]+)([M=XIDS])')


def gapful(record, insertions=True):
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