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Update InputsOutputs.rst for AQM inputs
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37 changes: 24 additions & 13 deletions doc/UsersGuide/source/InputsOutputs.rst
Original file line number Diff line number Diff line change
Expand Up @@ -28,7 +28,7 @@ mediator). Currently, supported configurations include:
* - ATMAERO
- :term:`ATM` coupled to :term:`GOCART`
* - ATMAQ
- :term:`ATM` coupled to :term:`CMAQ`
- :term:`ATM` coupled to :term:`AQM`
* - ATML
- :term:`ATM` coupled to :term:`NOAHMP`
* - ATMF
Expand Down Expand Up @@ -1078,7 +1078,7 @@ The aerosol initial input currently read by GOCART is the same format as the UFS
.. _aqm-in:

--------------
AQM (CMAQ)
UFS AQM
--------------

.. _aqm-fix-files:
Expand Down Expand Up @@ -1110,21 +1110,21 @@ AQM inputs defined in ``aqm.rc`` are listed and described in :numref:`Table %s <

* - Filename
- Description
* - AE_cb6r3_ae6_aq.nml
- AE Matrix NML
* - GC_cb6r3_ae6_aq.nml
- GC Matrix NML
* - NR_cb6r3_ae6_aq.nml
- NR Matrix NML
* - AE_cb6r5_ae7_aq.nml
- AE Matrix NML - Specifies chemical species, emissions mapping, and related settings for CMAQ's CB6r5 (Revision 5 of the Carbon Bond 6 Mechanism) chemical mechanism.
* - GC_cb6r5_ae7_aq.nml
- GC Matrix NML - Configures CMAQ's gas-phase chemistry controls.
* - NR_cb6r5_ae7_aq.nml
- NR Matrix NML - Non-reactive, gas-phase chemical species configuration for CMAQ.
* - Species_Table_TR_0.nml
- TR Matrix NML
* - CSQY_DATA_cb6r3_ae6_aq
- CSQY Data
- TR Matrix NML - CMAQ species transport definitions. Empty in the UFS as CMAQ is used as a column model with tracer transport using FV3.
* - CSQY_DATA_cb6r5_ae7_aq
- CSQY Data - CMAQ's chemical stoichiometric yield data table used by the solver for numerical calculations.
* - PHOT_OPTICS.dat
- Optics Data
* - omi_cmaq_2015_361X179.dat
- OMI data
* - NEXUS/NEXUS_Expt.nc
- OMI data - Ozone Monitoring Instrument (OMI) profile mappings used in establishing CAMQ boundary conditions.
* - INPUT/NEXUS_Expt.nc
- Emissions File
* - BEIS_RRFScmaq_C775.ncf
- Biogenic File
Expand All @@ -1133,6 +1133,17 @@ AQM inputs defined in ``aqm.rc`` are listed and described in :numref:`Table %s <
* - Hourly_Emissions_regrid_rrfs_13km_20190801_t12z_h72.nc
- File Emissions File


The most recent AQM input data files are in input-data-202XXXXX/AQM directory which can be found in the Weather Models S3 bucket (https://noaa-ufs-regtests-pds.s3.amazonaws.com/index.html). Below are the different data directories that exist in "AQM"

* - fix files
- Fix files are static, climatological, and topographical datasets required for model initialization and running. These files include terrain, land use, vegetation, and soil data.
* - NEXUS files
- "NEXUS" (NOAA Emission and eXchange Unified System) files are specialized input files used for air quality modeling within the SRW App to incorporate pollutant emissions data.
* - INPUT files
- This directory contains pre-processing, initial conditions, grid-dependent, and namelist files.


.. _lnd-in:

--------------
Expand Down