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2fdbe9b
feat(codeowners): keep a list GPE-2599
jbarno Jul 22, 2026
5a66958
feat(rename): move prc to unfunded GPE-2599
jbarno Jul 22, 2026
3d3bbbd
fix(sa): was tied to specific service account
jbarno Jul 23, 2026
fee736f
fix(calico): cilium already deployed
jbarno Jul 24, 2026
ba3e7cf
feat(unfunded): move things to unfunded
jbarno Jul 24, 2026
e8f0606
feat(cluster_values): consolidate cluster values
jbarno Jul 24, 2026
e43fb0b
feat(argo): update template for argo app
jbarno Jul 27, 2026
987fcdf
feat(roles): use the irsa roles just made during focus hours
jbarno Jul 27, 2026
b51974a
Update esEndpoint
ajoaugustine Jul 29, 2026
ae90076
Update values.yaml
ajoaugustine Jul 29, 2026
d4bf296
fix(hatcheryRole): looks like a bad copy pasta
jbarno Jul 30, 2026
fef29a4
fix(key): externalSecretAwsCreds I think
jbarno Jul 30, 2026
5785474
fix(arn): let the es-access not sa which it assumes
jbarno Jul 30, 2026
2c22c06
fix(audit): wrong role
jbarno Jul 30, 2026
17e1122
fix(dashboard): disable it
jbarno Jul 30, 2026
07cd8be
feat(mutating): turn on mutating webhook for the host records hopefully
jbarno Aug 3, 2026
3920ec4
fix(cert): new cert for the correct domain
jbarno Aug 4, 2026
0084fd0
fix(namespace): dont collide with other unfunded in the same jupyter-…
jbarno Aug 4, 2026
0f126d2
cost: reduce all service replicas from 2 to 1
jbarno Aug 5, 2026
ee9e162
cost: disable pod disruption budgets (pdb)
jbarno Aug 5, 2026
cbe46c7
feat(external): use external secrets for mapbox
jbarno Aug 7, 2026
e34cfb7
fix(cap): ooof mapbox not mapBox
jbarno Aug 13, 2026
6c8d1a4
fix(hosthack): remove mutatingwebhook that injects hostnames
jbarno Aug 13, 2026
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2 changes: 2 additions & 0 deletions CODEOWNERS
Original file line number Diff line number Diff line change
@@ -1,8 +1,10 @@
unfunded/caninedc.org @trevars @beamcb
dataguids/dataguids.org @trevars @beamcb
unfunded/icgc.bionimbus.org @trevars @beamcb
unfunded/.org @trevars @beamcb
unfunded/aids.diseasedatahub.org @beamcb
unfunded/tb.diseasedatahub.org @beamcb
unfunded/chicagoland.pandemicresponsecommons.org @trevars @beamcb
unfunded/flu.diseasedatahub.org @beamcb
unfunded/diseasedatahub.org @beamcb
dcf-staging/nci-crdc-staging.datacommons.io @jeffrey-knight
Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -10,13 +10,13 @@ spec:
sources:
- path: helm/gen3
repoURL: https://github.com/uc-cdis/gen3-helm
targetRevision: feat/deployment-canary
targetRevision: master
helm:
releaseName: gen3-covid19prod
valueFiles:
- $values/covid19prod/chicagoland.pandemicresponsecommons.org/values/values.yaml
- $values/unfunded/chicagoland.pandemicresponsecommons.org/values/values.yaml
- repoURL: 'https://github.com/uc-cdis/gen3-gitops.git'
targetRevision: master
targetRevision: feat/prc_unfunded
ref: values
destination:
server: "https://kubernetes.default.svc"
Expand Down
Original file line number Diff line number Diff line change
@@ -1,13 +1,13 @@
ambassador:
jupyterNamespace: jupyter-pods
jupyterNamespace: jupyter-pods-covid19prod-helm
arborist:
replicaCount: 2
replicaCount: 1
enabled: true
image:
repository: 707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/arborist
tag: '2026.08'
audit:
replicaCount: 2
replicaCount: 1
enabled: true
externalSecrets:
auditG3auto: covid19prod-audit-g3auto
Expand All @@ -16,17 +16,19 @@ audit:
tag: '2026.08'
serviceAccount:
annotations:
eks.amazonaws.com/role-arn: arn:aws:iam::236714345101:role/covid19prod--covid19prod-helm--audit-sqs-receiver
eks.amazonaws.com/role-arn: arn:aws:iam::662843554732:role/unfunded--covid19prod-helm--audit-sqs-receiver
auspice:
replicaCount: 2
replicaCount: 1
enabled: true
image:
repository: 707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/gen3-auspice
tag: v2.25.gen3.2.15
aws-sigv4-proxy:
replicaCount: 2
replicaCount: 1
enabled: true
esEndpoint: vpc-covid19prod-gen3-metadata-2-kd46ogc4c4lcwpmvkxwsprqgn4.us-east-1.es.amazonaws.com
esEndpoint: vpc-unfunded-gen3-metadata-2-tf3gyjftzrgm5asaxuvqxxwv2m.us-east-1.es.amazonaws.com
externalSecrets:
externalSecretAwsCreds: covid19-aws-es-proxy-creds
awshelper:
enabled: true
image:
Expand All @@ -48,17 +50,17 @@ covid19-notebook-etl:
repository: 707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/covid19-notebook-etl
tag: 5.1.6
dashboard:
replicaCount: 2
replicaCount: 1
dashboardConfig:
bucket: dashboard-236714345101-covid19-prod-gen3
prefix: chicagoland.pandemicresponsecommons.org
enabled: true
enabled: false
image:
repository: 707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/gen3-statics
tag: '2026.08'
serviceAccount:
annotations:
eks.amazonaws.com/role-arn: arn:aws:iam::236714345101:role/covid19prod--covid19prod-helm--dashboard-access
eks.amazonaws.com/role-arn: arn:aws:iam::662843554732:role/unfunded--covid19prod-helm--dashboard-access
etl:
esEndpoint: elasticsearch
etlMapping:
Expand Down Expand Up @@ -427,13 +429,13 @@ etl:
spark:
tag: '2026.08'
fence:
replicaCount: 2
replicaCount: 1
usersync:
usersync: true
userYamlS3Path: s3://cdis-gen3-users/covid19/user.yaml
serviceAccount:
annotations:
eks.amazonaws.com/role-arn: arn:aws:iam::236714345101:role/covid19prod--covid19prod-helm--audit-sqs-sender
eks.amazonaws.com/role-arn: arn:aws:iam::662843554732:role/unfunded--covid19prod-helm--audit-sqs-sender
enabled: true
externalSecrets:
createK8sGoogleAppSecrets: true
Expand All @@ -448,18 +450,20 @@ fluentd:
repository: fluent/fluentd-kubernetes-daemonset
tag: v1.15.3-debian-cloudwatch-1.0
global:
pdb: true
pdb: false
aws:
account: '236714345101'
awsEsProxyRole: covid19prod--covid19prod-helm--es-access
awsEsProxyRoleArn: arn:aws:iam::662843554732:role/unfunded--covid19prod-helm--es-access
enabled: true
hatchery_role: covid19prod--covid19prod-helm--hatchery-sa
useLocalSecret:
enable: false
localSecretName: external-secrets-covid19-secret
secretStoreServiceAccount:
enabled: true
roleArn: arn:aws:iam::236714345101:role/covid19prod--covid19prod-helm--external-secrets-sa
roleArn: arn:aws:iam::662843554732:role/unfunded--covid19prod-helm--external-secrets-sa
wafv2:
enabled: true
wafAclArn: arn:aws:wafv2:us-east-1:236714345101:regional/webacl/covid19prod-waf/0ca854eb-0058-49ee-86b5-749c6630ea99
wafAclArn: arn:aws:wafv2:us-east-1:662843554732:regional/webacl/unfunded-waf/e10ae423-8e4e-48ba-9a0e-52b43f28f6d4
hatchery_role: unfunded--covid19prod-helm--hatchery-sa
dev: false
dictionaryUrl: https://s3.amazonaws.com/dictionary-artifacts/covid19-datadictionary/3.9.2/schema.json
dispatcherJobNum: '10'
Expand All @@ -468,6 +472,7 @@ global:
deploy: true
createSlackWebhookSecret: true
slackWebhookSecretName: covid19prod-slack-webhook
mapboxTokenSecretName: covid19prod-mapbox-token
hostname: chicagoland.pandemicresponsecommons.org
fenceURL: https://chicagoland.pandemicresponsecommons.org/user
publicDataSets: true
Expand All @@ -481,9 +486,9 @@ global:
portalApp: gitops
postgres:
dbCreate: false
revproxyArn: arn:aws:acm:us-east-1:236714345101:certificate/e5edf56f-4003-4ee3-9ecd-162aaf19c058
revproxyArn: arn:aws:acm:us-east-1:662843554732:certificate/843a0993-4bea-4cf1-87b2-49d7c2d75a80
guppy:
replicaCount: 2
replicaCount: 1
authFilterField: auth_resource_path
configIndex: covid19_array-config
enabled: true
Expand All @@ -503,15 +508,15 @@ guppy:
- index: covid19_dataset
type: dataset
hatchery:
replicaCount: 2
replicaCount: 1
enabled: true
image:
repository: 707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/hatchery
tag: '2026.08'
hatchery:
json: |-
{
"user-namespace": "jupyter-pods",
"user-namespace": "jupyter-pods-covid19prod-helm",
"sub-dir": "/lw-workspace",
"user-volume-size": "10Gi",
"sidecar": {
Expand Down Expand Up @@ -617,7 +622,7 @@ hatchery:
]
}
indexd:
replicaCount: 2
replicaCount: 1
defaultPrefix: dg.63D5/
enabled: true
externalSecrets:
Expand All @@ -626,7 +631,7 @@ indexd:
repository: 707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/indexd
tag: '2026.08'
manifestservice:
replicaCount: 2
replicaCount: 1
enabled: true
externalSecrets:
manifestserviceG3auto: covid19prod-manifestservice-g3auto
Expand All @@ -635,9 +640,9 @@ manifestservice:
tag: '2026.08'
serviceAccount:
annotations:
eks.amazonaws.com/role-arn: arn:aws:iam::236714345101:role/covid19prod--covid19prod-helm--manifest-service-sa
eks.amazonaws.com/role-arn: arn:aws:iam::662843554732:role/unfunded--covid19prod-helm--manifest-service-sa
metadata:
replicaCount: 2
replicaCount: 1
enabled: true
esEndpoint: http://elasticsearch:9200
externalSecrets:
Expand All @@ -648,13 +653,13 @@ metadata:
mutatingWebhook:
enabled: false
peregrine:
replicaCount: 2
replicaCount: 1
enabled: true
image:
repository: 707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/peregrine
tag: '2026.08'
portal:
replicaCount: 2
replicaCount: 1
enabled: true
resources:
requests:
Expand All @@ -670,7 +675,7 @@ portal:
repository: 707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/data-portal
tag: '2026.08'
revproxy:
replicaCount: 2
replicaCount: 1
enabled: true
image:
repository: 707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/nginx
Expand All @@ -679,13 +684,13 @@ revproxy:
aws:
group: covid19prod
sheepdog:
replicaCount: 2
replicaCount: 1
enabled: true
image:
repository: 707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/sheepdog
tag: '2026.08'
sower:
replicaCount: 2
replicaCount: 1
enabled: true
externalSecrets:
createK8sPelicanServiceSecret: true
Expand Down Expand Up @@ -756,7 +761,7 @@ spark:
repository: 707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/gen3-spark
tag: '2026.05'
ssjdispatcher:
replicaCount: 2
replicaCount: 1
enabled: true
externalSecrets:
credsFile: covid19prod-ssjdispatcher-creds
Expand All @@ -770,7 +775,7 @@ tube:
repository: 707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/tube
tag: '2026.05'
wts:
replicaCount: 2
replicaCount: 1
enabled: true
externalSecrets:
createWtsOidcClientSecret: false
Expand Down
3 changes: 2 additions & 1 deletion unfunded/cluster-values/cluster-values.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -15,7 +15,7 @@ aws-s3-mountpoint:
enabled: false

calico:
enabled: true
enabled: false
configuration:
enabled: false

Expand Down Expand Up @@ -97,6 +97,7 @@ vpc-cni:
enabled: false
configuration:
enabled: false

kube-proxy:
enabled: false

Expand Down
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