installation_notes

Installing Trinity and other analysis tools

Trinity can be downloaded and installed from the Trinity website http://trinityrnaseq.github.io

Similarly Trinotate/TrinotateWeb can be installed from http://Trinotate.github.io

All installation commands that were used to install software on Amazon for use with this workshop are included in the Docker file: https://raw.githubusercontent.com/trinityrnaseq/BerlinTrinityWorkshop2017/master/__setup/docker/Dockerfile

and any system administrator could install these tools for you on a server at your local institution. Only Trinity assembly may require a high-memory machine (containing > 100 G RAM). Everything else can run on conventional computing resources.