🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction
An R package for studying mutational signatures and structural variant signatures along clonal evolution in cancer.
A statistical approach for clonal deconvolution in cancer using longitudinal NGS data
Website for the fibroblast clonality project conducted at EMBL-EBI and the Wellcome Sanger Institute ca 2017-2019.
Calculation of clonality (distances) based on color profiles (Saturation, Hue, and Lightness values)
Detail WGS data simulation
Zhian Kamvar's Ph. D. dissertation from Oregon State University
R package for clonal deconvolution
PhylogicNDT dockcer for clonal evolution analysis
Single-cell transcriptomic and B-lymphocyte repertoire analysis with R (Seurat)
Reopsitory with raw data and code to analyse the relationship between environmental conditions and clonality in Lepidium draba.
Genomic decomposition and reconstruction of non-tumor diploid subclones
R library for the analysis of partially clonal populations of polyploid individuals
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