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UW Sauro Lab

32 followers
Seattle
http://www.sys-bio.org
hsauro@u.washington.edu

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tellurium tellurium Public

Python Environment for Modeling and Simulating Biological Systems

Python 123 39
roadrunner roadrunner Public

Forked from AndySomogyi/sbmlsolver

libRoadRunner: A high-performance SBML simulator

C++ 51 28

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Showing 10 of 117 repositories

antimony Public

sys-bio/antimony’s past year of commit activity

C++ 18 BSD-3-Clause 4 19 0 Updated Sep 19, 2025
SBMLNetwork Public Forked from adelhpour/SBMLNetwork
SBMLNetwork is a library designed to enable software developers and systems biologists to interact with the graphical representation of SBML (Systems Biology Markup Language) models.

sys-bio/SBMLNetwork’s past year of commit activity

C++ 1 MIT 1 7 0 Updated Sep 19, 2025
libroadrunner-deps Public
Dependencies for libroadrunner

sys-bio/libroadrunner-deps’s past year of commit activity

CMake 3 5 1 1 Updated Sep 19, 2025
WebIridium Public
Web-based simulation and analysis of biological models

sys-bio/WebIridium’s past year of commit activity

TypeScript 0 0 14 (3 issues need help) 0 Updated Sep 17, 2025
AAAIM Public

sys-bio/AAAIM’s past year of commit activity

Jupyter Notebook 1 MIT 1 0 0 Updated Sep 17, 2025
cesium Public
Database of Oscillatory and random chemical network models written in Antimony format.

sys-bio/cesium’s past year of commit activity

HTML 0 1 0 0 Updated Sep 10, 2025
TabularQual Public

sys-bio/TabularQual’s past year of commit activity

Python 4 MIT 0 0 0 Updated Sep 6, 2025
BiomodelsStore Public Forked from konankisa/BiomodelsStore

sys-bio/BiomodelsStore’s past year of commit activity

JavaScript 0 1 0 0 Updated Sep 1, 2025
SimBioUI Public
Web systems biology simulator

sys-bio/SimBioUI’s past year of commit activity

JavaScript 0 MIT 2 14 0 Updated Aug 22, 2025
ratesb_python Public
Analysis of rate laws in reaction networks.

sys-bio/ratesb_python’s past year of commit activity

Python 1 MIT 2 8 1 Updated Aug 18, 2025

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