add portal_data to data items

swpease · Jun 5, 2023 · a230f90 · a230f90
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diff --git a/R/globals.R b/R/globals.R
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+#' Prevent R CMD Check notes about missing global variables due to
+#' dplyr mutates etc...
+#' @noRd
+utils::globalVariables(c("y", "year", "smooth_vals", "smooth_num",
+                         "series", "season", "rowid", "row_number",
+                         "nsp", "last_assim", "index", "in_interval",
+                         "assimilated", "eval_horizon", "label",
+                         "mod_call", "particles", "obs", "mgcv_model",
+                         "param_name", "outcome", "mgcv_plottable"))
diff --git a/R/portal_data.R b/R/portal_data.R
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+#' Portal Project rodent capture survey data
+#'
+#' A dataset containing timeseries of select rodent species captures in control plots from the Portal Project
+#'
+#' @format A dataframe containing the following fields:
+#' \describe{
+#' \item{moon}{time of sampling in lunar cycles}
+#' \item{DM}{Total captures of species DM}
+#' \item{DO}{Total captures of species DO}
+#' \item{DM}{Total captures of species PP}
+#' \item{DM}{Total captures of species OT}
+#' \item{year}{Sampling year}
+#' \item{month}{Sampling month}
+#' \item{mintemp}{Monthly mean minimum temperature}
+#' \item{precipitation}{Monthly mean precipitation}
+#' \item{ndvi}{Monthly mean Normalised Difference Vegetation Index}
+#' }
+#' @source \url{https://www.weecology.org/data-projects/portal/}
+"portal_data"
+
diff --git a/data/portal_data.rda b/data/portal_data.rda
diff --git a/docs/reference/portal_data.html b/docs/reference/portal_data.html
diff --git a/docs/reference/sim_mvgam-1.png b/docs/reference/sim_mvgam-1.png
diff --git a/docs/reference/sim_mvgam-2.png b/docs/reference/sim_mvgam-2.png
diff --git a/man/portal_data.Rd b/man/portal_data.Rd