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build(deps): bump com.google.protobuf:protobuf-java from 4.28.2 to 4.35.0#13

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build(deps): bump com.google.protobuf:protobuf-java from 4.28.2 to 4.35.0#13
dependabot[bot] wants to merge 168 commits into
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dependabot/maven/com.google.protobuf-protobuf-java-4.35.0

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@dependabot dependabot Bot commented on behalf of github May 20, 2026

Bumps com.google.protobuf:protobuf-java from 4.28.2 to 4.35.0.

Commits

…hunker, TextUtils and add chunked ingestion for large documents
- QuantizationType enum (NONE, SCALAR_INT8)
- ScalarQuantizer with min/max calibration and INT8 encoding
- QuantizedCosineSimilarity and QuantizedDotProduct SIMD kernels
- SimilarityFunction updated with quantized variants
- ScalarQuantizerTest for encode/decode and batch operations
- PersistenceMode enum (IN_MEMORY, DISK, MMAP)
- IndexFileFormat for binary HNSW serialization
- QuantizedVectorStore with INT8 compression
- InMemoryVectorStore concurrent access improvements
- DiskHnswWriter for binary HNSW graph serialization
- DiskHnswIndex for mmap-based read-only index loading
- QuantizedHnswIndex with INT8 scalar quantization (4x memory reduction)
- BM25Index and HnswIndex performance improvements
- DiskHnswIndexTest and QuantizedHnswIndexTest
- ProductQuantizer: K-Means++ codebook training, PQ encode/decode, ADC
  distance computation, batch encoding
- IvfPqIndex: full IVF-PQ implementing VectorIndex SPI with cluster
  assignment, residual-based PQ encoding, and multi-probe search
- PostingList: per-cluster growable storage for PQ codes
- 14 tests: PQ training/encode/decode/ADC + IVF-PQ search/recall/sorting
- Reranker SPI interface for pluggable re-ranking strategies
- LlmReranker: listwise relevance scoring using Ollama generate API
  with prompt-based 0-10 scoring and graceful fallback
- HybridSearchOrchestrator: integrated optional re-ranking post-processing
- LlmRerankerTest: fallback behavior, empty input, topK limiting
- spector-gpu Maven module with Panama FFM CUDA bindings
- GpuCapability: runtime CUDA detection (device count, name, memory)
- GpuBatchSimilarity: SIMD-optimized batch dot product and cosine
  similarity using FMA Vector API operations
- CudaKernelLauncher: PTX module loader, function resolver, kernel
  launcher with grid/block configuration
- batch_similarity.cu: CUDA kernels for batch_cosine, batch_dot, batch_l2
  with block-level shared memory reduction
- 14 tests: GPU detection, batch similarity correctness, CUDA launcher
…hitecture

- spector-cluster Maven module with gRPC/protobuf integration
- spector_search.proto: 6 RPC definitions (vector, keyword, hybrid
  search, ingest, health check, stats)
- ClusterCoordinator: fan-out/merge query execution via virtual threads
  with consistent hash shard routing
- ShardNode: gRPC server wrapping SpectorEngine
- SpectorSearchServiceImpl: full gRPC service delegating to local engine
- RemoteShardClient: type-safe gRPC client for all 5 RPC methods
- ClusterConfig: multi-node endpoint configuration with replication
- ClusterConfigTest: routing, hash consistency, topology tests
…rEngine

- IndexType enum (HNSW, IVF_PQ) for configurable index strategy
- SpectorConfig: added indexType, ivfNlist, ivfNprobe, pqSubspaces with
  builder methods (withIvfPq) and auto-defaults
- SpectorEngine: IVF-PQ auto-training pipeline that buffers ingested
  vectors and trains PQ codebooks after nlist*40 samples
- Backward-compatible 7-arg constructor preserved
- 4 new tests: auto-training, keyword search during buffering, config
  builder, auto-defaults
- HeavyPerformanceBenchmark: keyword/vector/hybrid at 50K-100K scale
- IvfPqBenchmark: IVF-PQ search, PQ encode/decode, ADC distance, batch
  cosine similarity at 10K-50K scale
- ConcurrencyBenchmark: multi-threaded search throughput
- IngestionBenchmark: document ingestion throughput
- PerformanceTestRunner: standalone runner with formatted results
- pom.xml: added spector-gpu, spector-cluster modules to reactor
  and dependencyManagement
- README.md: expanded architecture (13 modules), 5 new features,
  updated comparison table (quantization, IVF-PQ, GPU, LLM, distributed),
  updated test suite (316+ tests), added roadmap checklist
Extract ~300 lines of duplicated graph traversal code (greedyClosest,
searchLayer, selectNeighbors, addConnection, getNeighbors, setNeighbors)
into AbstractHnswIndex base class with three template method hooks:

- computeDistance(float[], int) — distance from query to stored node
- getNodeVector(int) — float32 vector retrieval for pruning
- storeVector(int, float[]) — vector storage on insertion

HnswIndex: 413 -> 76 lines (-81%)
QuantizedHnswIndex: 476 -> 226 lines (-53%)

All 316+ tests passing, zero regressions.
- VectorIndex: add default isReadOnly() method (returns false)
- DiskHnswIndex: override isReadOnly() to return true
- KeywordIndex: add default remove(String id) method
- BM25Index: expose existing removeDoc() logic via KeywordIndex.remove()

Completes the deletion API path across the engine.
- Add gpuEnabled, rerankerEnabled, rerankerOllamaUrl, rerankerModel,
  rerankerMaxCandidates fields to SpectorConfig record
- Add with*() builder-style methods for GPU and reranker config
- Add IVF-PQ computed defaults (effectiveNlist, effectiveNprobe, etc.)
- Add spector-gpu dependency to engine POM
sbharatjoshi and others added 24 commits May 28, 2026 23:53
EngineComponentFactory now always creates writable components, then
loads existing data from disk via addPrebuilt(). Eliminates the
mutually exclusive read-only vs fresh-empty startup paths.

Flow: create writable store/index → load ID mappings → copy DiskHnswIndex
graph into writable HnswIndex → load DocumentStore. All data survives
restarts while remaining fully writable for new ingestion.
With the unified startup path, forceWritable is no longer needed:
- SpectorConfig: remove forceWritable field + withForceWritable()
- SpectorConfigFactory: remove from EngineDefaults record
- SpectorRuntime: remove 3-arg from() overload
- IngestCommand: use standard 2-arg from()
- Tests: update path expectations (.spector/index, .spector/memory)
- Change engine data-directory default from .spector-data to .spector/index
- Change memory persistence-path default from .spector-memory to .spector/memory
- Align with code defaults in SpectorConfigFactory
- Update .gitignore to use single .spector/ entry
- Update all READMEs with corrected paths
- 40-byte binary record layout (RFC-style wire format)
- Chunked file architecture with rolling and snapshot-driven truncation
- Corruption Recovery Strategy: torn writes vs mid-log bit rot taxonomy
- Compaction & Garbage Collection policy with snapshot-aware truncation
- CRDT merge semantics and cloud replication architecture
- Compression (DEFLATE) and configuration reference
- Update .spector-memory → .spector/memory in all docs
- Update .spector-data → .spector/index in MCP server docs
- Fix modules nav: add spector-node/config/metrics/dist, remove stale server/cluster
- Delete stale spector-server.md and spector-cluster.md doc pages
- Register extra_css and mermaid-init.js in mkdocs.yml (was missing)
Engine close() now uses ShardedDiskHnswWriter which writes to
index_shards/ directory, not a single index.spct file.
The standalone Armeria server has been consolidated into spector-node
which provides REST + gRPC + SSE + cluster coordination.
Cluster coordination, shard management, and replication are
planned for V3. Removing premature scaffolding to reduce build
surface and test noise.
- Remove spector-server and spector-cluster from root POM modules
- Update dependency versions and module cross-references
…ctorProperties

- PersistenceFiles record for centralized persistence file naming
- SpectorConfig enhancements for sharded index persistence
- SpectorProperties improvements for typed config access
…ed persistence on close

- EngineComponentFactory now accepts PersistenceFiles for disk I/O
- DefaultSpectorEngine.close() persists via ShardedDiskHnswWriter
- EngineIngestion updated for new component wiring
…dex improvements

- ShardedDiskHnswIndex and ShardedDiskHnswWriter for multi-shard persistence
- AbstractHnswIndex shared base for HNSW variants
- DiskHnswIndex and DiskHnswWriter updates
- QuantizedHnswIndex enhancements
- SpectorIndex and SpectorShard refinements
- ShardedMappedVectorStore for multi-shard vector persistence
- ShardedIndexFormat for shard file layout
- MappedVectorStore and VectorStoreFactory refinements
…lectDaemon improvements

- MemoryWal: ReentrantLock for virtual thread safety, corruption recovery
- WalCorruptionException for explicit corruption signaling
- CognitiveRecordLayout and SynapticHeaderConstants alignment
- CloudSync CRDT merge semantics
- DefaultSpectorMemory composition
- ReflectDaemon hippocampus refinements
- Updated wiring for engine + memory + ingestion pipeline
- Aligned with unified .spector/ directory structure
- MemoryPinning for virtual thread memory safety
- NativeOsMemory for OS-level memory operations
- CognitiveMemoryBenchmark for memory subsystem performance
- Updated concurrency, ingestion, and index operation benchmarks
- Spring AI integration auto-config
- Resource configuration files
- Armeria-based HTTP REST + gRPC + SSE event streaming
- Cluster coordination and node management
- Replaces spector-server with full-featured unified node
- Prometheus metric collectors
- JVM memory and GC instrumentation
- Health check endpoints
- README updated with new module structure and directory paths
- CHANGELOG reflects server→node, cluster removal, WAL improvements
- Architecture, API, getting-started, and configuration docs updated
- Scripts updated for .spector/ directory and MCP config
- Deploy configuration added
- CONTRIBUTING guide updated
- SpectorProperties test defaults
- MappedVectorStore test updates
- SpectorToolRegistryTest updates
- MemoryWal persistence and integration tests
- Commons concurrent utility tests
- Spring auto-config tests
- Update roadmap skill scripts
Rules:
- Project-wide coding standards, architecture boundaries, git conventions

Skills:
- coding-standards: Java 25, Panama FFM, SIMD, naming, class structure
- code-review: 8-step structured review with checklist
- doc-sync: code-to-documentation sync mapping
- incremental-commits: dependency-ordered commit grouping

Workflows:
- feature-development: requirements to commit end-to-end
- pr-review: diff analysis to verdict
- module-lifecycle: add/remove/rename Maven modules
- documentation-update: write, build, verify docs
- release-prep: test, changelog, version bump, tag
- perf-investigation: profile, optimize, benchmark
Bumps [com.google.protobuf:protobuf-java](https://github.com/protocolbuffers/protobuf) from 4.28.2 to 4.35.0.
- [Release notes](https://github.com/protocolbuffers/protobuf/releases)
- [Commits](https://github.com/protocolbuffers/protobuf/commits)

---
updated-dependencies:
- dependency-name: com.google.protobuf:protobuf-java
  dependency-version: 4.35.0
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
@dependabot dependabot Bot changed the title chore(deps): bump com.google.protobuf:protobuf-java from 4.28.2 to 4.35.0 build(deps): bump com.google.protobuf:protobuf-java from 4.28.2 to 4.35.0 May 30, 2026
@dependabot dependabot Bot force-pushed the dependabot/maven/com.google.protobuf-protobuf-java-4.35.0 branch from 779abcc to ca6f634 Compare May 30, 2026 00:16
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dependabot Bot commented on behalf of github Jun 1, 2026

OK, I won't notify you again about this release, but will get in touch when a new version is available. If you'd rather skip all updates until the next major or minor version, let me know by commenting @dependabot ignore this major version or @dependabot ignore this minor version. You can also ignore all major, minor, or patch releases for a dependency by adding an ignore condition with the desired update_types to your config file.

If you change your mind, just re-open this PR and I'll resolve any conflicts on it.

@dependabot dependabot Bot deleted the dependabot/maven/com.google.protobuf-protobuf-java-4.35.0 branch June 1, 2026 13:57
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