Skip to content

Pull requests: soedinglab/MMseqs2

New pull request New
15 Open 71 Closed
15 Open 71 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Reviews
Filter by reviews
No reviews Review required Approved review Changes requested
Assignee
Filter by who’s assigned
Assigned to nobody Loading
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Pull requests list

Fix bug in IndexTable::printStatistics
#1004 opened Jun 12, 2025 by lukecavabarrett Loading…
2
createtsv works for SETdb
#1003 opened Jun 11, 2025 by sooyoung-cha Loading…
Update setupKmerSplits to avoid redundant writes in fillKmerPositionA…
#997 opened May 30, 2025 by ChunShow Loading…
Added AVX512 intrinsics-based Ungapped SW alignent kernel
#983 opened Apr 14, 2025 by gsc74 Loading…
createsubdb supports list of indexes as an input
#957 opened Feb 19, 2025 by sooyoung-cha Loading…
Change createdb.cpp so that it takes in ".txt" file containing paths of different fasta files
#879 opened Aug 26, 2024 by elpis51613 Loading…
3
alignproteome added
#875 opened Aug 18, 2024 by martin-steinegger Loading…
33
NEXT LINCLUST
#873 opened Aug 14, 2024 by ChunShow Loading…
13
Allow passing different values for nucleotide and aminoacid for spacedKmers
#867 opened Jul 25, 2024 by elpis51613 Loading…
fix bad memory allocation with initX
#787 opened Dec 6, 2023 by gamcil Loading…
Add the VTML200 substitution matrix
#769 opened Oct 28, 2023 by apcamargo Loading…
2
make it so that pairaln requires only .idx_mapping if .idx input is used
#694 opened Apr 19, 2023 by xeniorn Loading…
Fix gff2db segfault, and keep entryname in lookup when multithreaded
#635 opened Nov 3, 2022 by RuoshiZhang Loading…
Add createdb support for sequence db input
#545 opened Mar 2, 2022 by matchy233 Loading…
9
CMakeLists.txt: Properly handle cpu flags
#533 opened Feb 13, 2022 by Nowa-Ammerlaan Loading…
4
ProTip! Adding no:label will show everything without a label.