Skip to content

Commit

Permalink
2020-10-27 reproducible computation at scale in R
Browse files Browse the repository at this point in the history
  • Loading branch information
johnpeach committed Oct 25, 2020
1 parent 4ceacde commit fbd3943
Show file tree
Hide file tree
Showing 40 changed files with 1,708 additions and 0 deletions.
20 changes: 20 additions & 0 deletions 2020-10-27_reproducible_computation_at_scale_in_R/.gitignore
Original file line number Diff line number Diff line change
@@ -0,0 +1,20 @@
*~
*.html
*.out
*.Rout
.DS_Store
.future
.Rapp.history
.RData
.Rhistory
.Rproj.user/
_targets/
_targets.R
abstract
cor.csv
cor.png
ecat.md
miniconda
results.html
results.Rmd
virtualenvs
3 changes: 3 additions & 0 deletions 2020-10-27_reproducible_computation_at_scale_in_R/README.md
Original file line number Diff line number Diff line change
@@ -0,0 +1,3 @@
# Reproducible computation at scale in R with targets

Ambitious workflows in R, such as machine learning analyses, can be difficult to manage. A single round of computation can take several hours to complete, and routine updates to the code and data tend to invalidate hard-earned results. You can enhance the maintainability, hygiene, speed, scale, and reproducibility of such projects with the targets R package. targets resolves the dependency structure of your analysis pipeline, skips tasks that are already up to date, executes the rest with optional distributed computing, and manages data storage for you. It surpasses the permanent limitations of its predecessor, drake, and provides increased efficiency and a smoother user experience. This talk demonstrates how to create and maintain a Bayesian model validation project using targets-powered automation.
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Original file line number Diff line number Diff line change
@@ -0,0 +1,4 @@
https://openclipart.org/detail/216179/messy-desk
https://openclipart.org/detail/275842/sisyphus-overcoming-silhouette
https://creativecommons.org/publicdomain/zero/1.0/
https://openclipart.org/unlimited-commercial-use-clipart
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
446 changes: 446 additions & 0 deletions 2020-10-27_reproducible_computation_at_scale_in_R/images/logo.svg
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Binary file not shown.
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Binary file not shown.
Binary file not shown.
Loading

0 comments on commit fbd3943

Please sign in to comment.