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Dependency Issue With Scipy #29

@AndrewLutsky

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@AndrewLutsky

Right now, you require python 3.8 (this is required for fa2), however scipy 1.11.4 requires python 3.9. I think this can be solved by downgrading scipy to 1.10? Please correct me if I am wrong.


pip install -e .
Obtaining file:///data/.../SCARlink
  Preparing metadata (setup.py) ... done
Collecting shap==0.41.0 (from scarlink==1.1.1)
  Using cached shap-0.41.0-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl.metadata (3.0 kB)
Collecting tables==3.7.0 (from scarlink==1.1.1)
  Using cached tables-3.7.0-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.0 kB)
Collecting scikit-learn==1.2.1 (from scarlink==1.1.1)
  Using cached scikit_learn-1.2.1-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (11 kB)
INFO: pip is looking at multiple versions of scarlink to determine which version is compatible with other requirements. This could take a while.
ERROR: Ignored the following versions that require a different python version: 0.45.0 Requires-Python >=3.9; 0.45.1 Requires-Python >=3.9; 0.46.0 Requires-Python >=3.9; 0.47.0 Requires-Python >=3.9; 0.47.1 Requires-Python >=3.9; 0.47.2 Requires-Python >=3.9; 0.48.0 Requires-Python >=3.9; 0.49.1 Requires-Python >=3.9; 0.50.0 Requires-Python >=3.11; 1.11.0 Requires-Python <3.13,>=3.9; 1.11.0rc1 Requires-Python <3.13,>=3.9; 1.11.0rc2 Requires-Python <3.13,>=3.9; 1.11.1 Requires-Python <3.13,>=3.9; 1.11.2 Requires-Python <3.13,>=3.9; 1.11.3 Requires-Python <3.13,>=3.9; 1.11.4 Requires-Python >=3.9; 1.12.0 Requires-Python >=3.9; 1.12.0rc1 Requires-Python >=3.9; 1.12.0rc2 Requires-Python >=3.9; 1.13.0 Requires-Python >=3.9; 1.13.0rc1 Requires-Python >=3.9; 1.13.1 Requires-Python >=3.9; 1.14.0 Requires-Python >=3.10; 1.14.0rc1 Requires-Python >=3.10; 1.14.0rc2 Requires-Python >=3.10; 1.14.1 Requires-Python >=3.10; 1.15.0 Requires-Python >=3.10; 1.15.0rc1 Requires-Python >=3.10; 1.15.0rc2 Requires-Python >=3.10; 1.15.1 Requires-Python >=3.10; 1.15.2 Requires-Python >=3.10; 1.15.3 Requires-Python >=3.10; 1.16.0 Requires-Python >=3.11; 1.16.0rc1 Requires-Python >=3.11; 1.16.0rc2 Requires-Python >=3.11; 1.16.1 Requires-Python >=3.11; 1.16.2 Requires-Python >=3.11; 1.16.3 Requires-Python >=3.11; 1.17.0 Requires-Python >=3.11; 1.17.0rc1 Requires-Python >=3.11; 1.17.0rc2 Requires-Python >=3.11; 1.4.0 Requires-Python >=3.9; 1.4.0rc1 Requires-Python >=3.9; 1.4.1.post1 Requires-Python >=3.9; 1.4.2 Requires-Python >=3.9; 1.5.0 Requires-Python >=3.9; 1.5.0rc1 Requires-Python >=3.9; 1.5.1 Requires-Python >=3.9; 1.5.2 Requires-Python >=3.9; 1.6.0 Requires-Python >=3.9; 1.6.0rc1 Requires-Python >=3.9; 1.6.1 Requires-Python >=3.9; 1.7.0 Requires-Python >=3.10; 1.7.0rc1 Requires-Python >=3.10; 1.7.1 Requires-Python >=3.10; 1.7.2 Requires-Python >=3.10; 1.8.0 Requires-Python >=3.11; 1.8.0rc1 Requires-Python >=3.11; 3.10.0 Requires-Python >=3.10; 3.10.1 Requires-Python >=3.10; 3.10.2 Requires-Python >=3.11; 3.9.1 Requires-Python >=3.9; 3.9.2 Requires-Python >=3.9
ERROR: Could not find a version that satisfies the requirement scipy==1.11.4 (from scarlink) (from versions: 0.8.0, 0.9.0, 0.10.0, 0.10.1, 0.11.0, 0.12.0, 0.12.1, 0.13.0, 0.13.1, 0.13.2, 0.13.3, 0.14.0, 0.14.1, 0.15.0, 0.15.1, 0.16.0, 0.16.1, 0.17.0, 0.17.1, 0.18.0, 0.18.1, 0.19.0, 0.19.1, 1.0.0, 1.0.1, 1.1.0, 1.2.0, 1.2.1, 1.2.2, 1.2.3, 1.3.0, 1.3.1, 1.3.2, 1.3.3, 1.4.0, 1.4.1, 1.5.0, 1.5.1, 1.5.2, 1.5.3, 1.5.4, 1.6.0, 1.6.1, 1.6.2, 1.6.3, 1.7.0, 1.7.1, 1.7.2, 1.7.3, 1.8.0rc1, 1.8.0rc2, 1.8.0rc3, 1.8.0rc4, 1.8.0, 1.8.1, 1.9.0rc1, 1.9.0rc2, 1.9.0rc3, 1.9.0, 1.9.1, 1.9.2, 1.9.3, 1.10.0rc1, 1.10.0rc2, 1.10.0, 1.10.1)
ERROR: No matching distribution found for scipy==1.11.4

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