chore(main): release 2.0.0

[snakemake-bot]

🤖 I have created a release beep boop

2.0.0 (2025-11-24)

⚠ BREAKING CHANGES

• proposal for dynamic partition selection (#321)

Features

• partition time handling (#378) (53be508)
• proposal for dynamic partition selection (#321) (95821f9)

Bug Fixes

• naming SLURM logs, SLURM logs not just "log files" (#372) (ce7cc4b)

Documentation

• Replace incorrect Markdown with a blockquote (#377) (b45709f)

---

This PR was generated with Release Please. See documentation.

Summary by CodeRabbit

• BREAKING CHANGES
  • Version 2.0.0 introduces breaking changes
• New Features
  • Dynamic partition selection functionality
• Bug Fixes
  • Multiple bug fixes included
• Documentation
  • Updated documentation for version 2.0.0

_{✏️ Tip: You can customize this high-level summary in your review settings.}

[coderabbitai]

Walkthrough

A release update that bumps the package version from 1.9.2 to 2.0.0 in pyproject.toml and inserts a new top-level 2.0.0 entry in CHANGELOG.md containing BREAKING CHANGES, Features, Bug Fixes, and Documentation notes. No code or API changes.

Changes

Cohort / File(s)	Change Summary
Release metadata & changelog CHANGELOG.md, pyproject.toml	Added a new top-level 2.0.0 changelog block (including BREAKING CHANGES, Features, Bug Fixes, Documentation) and updated pyproject.toml package version from 1.9.2 to 2.0.0. No functional or public-API edits.

Estimated code review effort

🎯 2 (Simple) | ⏱️ ~10 minutes

• Review focus: confirm version bump is intentional and changelog content/placement is correct.
• Files to inspect: pyproject.toml, CHANGELOG.md.

Possibly related PRs

• chore(main): release 1.2.13 #288 — similar release-related edits updating CHANGELOG.md and bumping package version.

Suggested labels

autorelease: tagged

Suggested reviewers

• cmeesters

Poem

🐰 I hopped to the changelog, light and spry,
Pushed two-dot-oh up to the sky,
Lines of change in neat array,
Version bumped — hooray, hooray! 🥕

Pre-merge checks and finishing touches

✅ Passed checks (3 passed)

Check name	Status	Explanation
Description Check	✅ Passed	Check skipped - CodeRabbit’s high-level summary is enabled.
Title check	✅ Passed	The title 'chore(main): release 2.0.0' accurately reflects the main change: a version bump to 2.0.0 with updated CHANGELOG entries.
Docstring Coverage	✅ Passed	No functions found in the changed files to evaluate docstring coverage. Skipping docstring coverage check.

✨ Finishing touches

🧪 Generate unit tests (beta)

• Create PR with unit tests
• Post copyable unit tests in a comment
• Commit unit tests in branch release-please--branches--main

---

📜 Recent review details

Configuration used: Path: .coderabbit.yaml

Review profile: CHILL

Plan: Pro

📥 Commits

Reviewing files that changed from the base of the PR and between 227dac7 and e190e6c.

📒 Files selected for processing (2)

• CHANGELOG.md (1 hunks)
• pyproject.toml (1 hunks)

✅ Files skipped from review due to trivial changes (1)

• CHANGELOG.md

🧰 Additional context used

🧠 Learnings (7)

📓 Common learnings

Learnt from: cmeesters
Repo: snakemake/snakemake-executor-plugin-slurm PR: 193
File: .github/workflows/post_to_mastodon.yml:26-26
Timestamp: 2025-01-20T09:13:26.443Z
Learning: In the snakemake-executor-plugin-slurm repository, release PRs follow the naming pattern "chore(main): release X.Y.Z" where X.Y.Z is the version number.

Learnt from: johanneskoester
Repo: snakemake/snakemake-executor-plugin-slurm PR: 173
File: docs/further.md:96-96
Timestamp: 2025-03-10T15:20:51.829Z
Learning: PR #173 in snakemake-executor-plugin-slurm implements GPU job support by adding resources: `gres` for generic resource specifications (e.g., 'gpu:1'), `gpu`/`gpus` for specifying GPU counts, and `gpu_model`/`gpu_manufacturer` for specifying GPU types, allowing users to request GPU resources directly rather than having to use slurm_extra.

Learnt from: cmeesters
Repo: snakemake/snakemake-executor-plugin-slurm PR: 0
File: :0-0
Timestamp: 2025-01-13T09:54:22.950Z
Learning: PR #173 (adding gres resource specification) depends on PR #28 in snakemake-executor-plugin-slurm-jobstep repository, as changes were required in the cpu-settings function of the jobstep-Executor module.

Learnt from: cmeesters
Repo: snakemake/snakemake-executor-plugin-slurm PR: 187
File: .github/workflows/post_to_mastodon.yml:0-0
Timestamp: 2025-01-17T17:27:32.446Z
Learning: In the mastodon publishing workflow for snakemake-executor-plugin-slurm, the PR_TITLE environment variable is required by the post_to_mastodon.sh script and should be preserved.

Learnt from: cmeesters
Repo: snakemake/snakemake-executor-plugin-slurm PR: 333
File: .github/workflows/announce-release.yml:0-0
Timestamp: 2025-07-22T17:31:41.629Z
Learning: In the snakemake-executor-plugin-slurm repository, cmeesters prefers using `main` references for GitHub Actions to always get the latest version, with security provided through protected branches and mandatory CI checks rather than commit SHA pinning.

Learnt from: cmeesters
Repo: snakemake/snakemake-executor-plugin-slurm PR: 178
File: snakemake_executor_plugin_slurm/__init__.py:0-0
Timestamp: 2024-12-11T14:17:08.749Z
Learning: In the `snakemake-executor-plugin-slurm` project, when handling exceptions in `snakemake_executor_plugin_slurm/__init__.py`, prefer concise error messages and avoid unnecessary verbosity or exception chaining when it's not necessary.

Learnt from: cmeesters
Repo: snakemake/snakemake-executor-plugin-slurm PR: 173
File: snakemake_executor_plugin_slurm/__init__.py:29-31
Timestamp: 2025-02-18T14:53:09.504Z
Learning: The snakemake-executor-plugin-slurm tests require system dependencies (gcc, python3-dev) to build the datrie package, which is a dependency of snakemake.

📚 Learning: 2025-01-20T09:13:26.443Z

Learnt from: cmeesters
Repo: snakemake/snakemake-executor-plugin-slurm PR: 193
File: .github/workflows/post_to_mastodon.yml:26-26
Timestamp: 2025-01-20T09:13:26.443Z
Learning: In the snakemake-executor-plugin-slurm repository, release PRs follow the naming pattern "chore(main): release X.Y.Z" where X.Y.Z is the version number.

Applied to files:

• pyproject.toml

📚 Learning: 2024-12-11T14:17:08.749Z

Learnt from: cmeesters
Repo: snakemake/snakemake-executor-plugin-slurm PR: 178
File: snakemake_executor_plugin_slurm/__init__.py:0-0
Timestamp: 2024-12-11T14:17:08.749Z
Learning: In the `snakemake-executor-plugin-slurm` project, when handling exceptions in `snakemake_executor_plugin_slurm/__init__.py`, prefer concise error messages and avoid unnecessary verbosity or exception chaining when it's not necessary.

Applied to files:

• pyproject.toml

📚 Learning: 2025-03-10T15:20:51.829Z

Learnt from: johanneskoester
Repo: snakemake/snakemake-executor-plugin-slurm PR: 173
File: docs/further.md:96-96
Timestamp: 2025-03-10T15:20:51.829Z
Learning: PR #173 in snakemake-executor-plugin-slurm implements GPU job support by adding resources: `gres` for generic resource specifications (e.g., 'gpu:1'), `gpu`/`gpus` for specifying GPU counts, and `gpu_model`/`gpu_manufacturer` for specifying GPU types, allowing users to request GPU resources directly rather than having to use slurm_extra.

Applied to files:

• pyproject.toml

📚 Learning: 2025-07-22T17:31:41.629Z

Learnt from: cmeesters
Repo: snakemake/snakemake-executor-plugin-slurm PR: 333
File: .github/workflows/announce-release.yml:0-0
Timestamp: 2025-07-22T17:31:41.629Z
Learning: In the snakemake-executor-plugin-slurm repository, cmeesters prefers using `main` references for GitHub Actions to always get the latest version, with security provided through protected branches and mandatory CI checks rather than commit SHA pinning.

Applied to files:

• pyproject.toml

📚 Learning: 2025-02-18T14:53:09.504Z

Learnt from: cmeesters
Repo: snakemake/snakemake-executor-plugin-slurm PR: 173
File: snakemake_executor_plugin_slurm/__init__.py:29-31
Timestamp: 2025-02-18T14:53:09.504Z
Learning: The snakemake-executor-plugin-slurm tests require system dependencies (gcc, python3-dev) to build the datrie package, which is a dependency of snakemake.

Applied to files:

• pyproject.toml

📚 Learning: 2025-09-09T15:55:55.669Z

Learnt from: cmeesters
Repo: snakemake/snakemake-executor-plugin-slurm PR: 0
File: :0-0
Timestamp: 2025-09-09T15:55:55.669Z
Learning: In the Snakemake SLURM executor plugin, Snakemake submits itself as a job using the --wrap parameter in the sbatch command, rather than creating or submitting a separate job.sh script file. The actual implementation uses `call += f' --wrap="{exec_job}"'` where exec_job is the formatted snakemake execution command.

Applied to files:

• pyproject.toml

⏰ Context from checks skipped due to timeout of 90000ms. You can increase the timeout in your CodeRabbit configuration to a maximum of 15 minutes (900000ms). (1)

• GitHub Check: testing

🔇 Additional comments (1)

pyproject.toml (1)

3-3: Version bump to 2.0.0 is appropriate and correctly formatted.

The semantic versioning bump from 1.9.2 to 2.0.0 aligns with the breaking changes noted in the PR objectives, and the format is valid for Poetry. This release update follows the expected automated release process.

Verify that CHANGELOG.md has been properly updated with the 2.0.0 release block (containing the BREAKING CHANGES, Features, Bug Fixes, and Documentation entries referenced in the PR objectives).

---

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[cmeesters]

release

[snakemake-bot]

🤖 Created releases:

• v2.0.0

🌻