shapelets · raulbocanegra · May 4, 2020 · May 4, 2020 · May 5, 2020 · May 5, 2020
diff --git a/docker/cuda/Dockerfile b/docker/cuda/Dockerfile
@@ -0,0 +1,90 @@
+FROM nvidia/cuda:10.1-devel-ubuntu18.04 AS khiva-cuda-builder-base
+RUN apt-get update && apt-get install -y --no-install-recommends \
+    software-properties-common \
+    build-essential \
+    cmake \
+    git \
+    libboost-all-dev \
+    libfftw3-dev \
+    libfreeimage-dev \
+    liblapack-dev \
+    liblapacke-dev \
+    libopenblas-dev \
+    openjdk-8-jdk \
+    python3-pip && \
+    pip3 install setuptools && \
+    pip3 install conan --upgrade && \
+    conan profile new --detect default && \
+    conan profile update settings.compiler.libcxx=libstdc++11 default && \
+    rm -rf /var/lib/apt/lists/* /var/tmp/* /tmp/*
+
+# AF_DISABLE_GRAPHICS - Environment variable to disable graphics at
+# runtime due to lack of graphics support by docker - visit
+# http://arrayfire.org/docs/configuring_environment.htm#af_disable_graphics
+# for more information
+# For build instructions: https://github.com/arrayfire/arrayfire/wiki/Build-Instructions-for-Linux
+ENV CXX g++-7
+ENV CC gcc-7
+WORKDIR /root
+
+COPY *.patch ./
+FROM khiva-cuda-builder-base AS arrayfire-cuda-builder
+ENV AF_DISABLE_GRAPHICS=1
+RUN git clone -b v3.6.2 --depth 1 --recurse-submodules -j 8 https://github.com/arrayfire/arrayfire.git && \
+    cd arrayfire && \
+    mkdir build && cd build && \
+    cmake .. -DCMAKE_INSTALL_PREFIX=/opt/arrayfire \
+             -DCMAKE_BUILD_TYPE=Release \
+             -DAF_BUILD_CPU=ON \
+             -DAF_BUILD_CUDA=ON \
+             -DAF_BUILD_OPENCL=OFF \
+             -DCUDA_cublas_device_LIBRARY=/usr/local/cuda/lib64 \
+             -DAF_BUILD_UNIFIED=ON \
+             -DAF_WITH_GRAPHICS=OFF \
+             -DAF_WITH_NONFREE=OFF \
+             -DAF_BUILD_EXAMPLES=OFF \
+             -DBUILD_TESTING=OFF \
+             -DAF_BUILD_DOCS=OFF \
+             -DAF_WITH_LOGGING=OFF \
+             -DAF_WITH_STATIC_FREEIMAGE=OFF && \
+    cmake --build . --target install -- -j8
+
+FROM khiva-cuda-builder-base AS khiva-cuda-builder
+ARG KHIVA_BRANCH=v0.5.0
+COPY --from=arrayfire-cuda-builder /opt/arrayfire /opt/arrayfire
+ENV JAVA_HOME /usr/lib/jvm/java-8-openjdk-amd64
+RUN echo /opt/arrayfire/lib > /etc/ld.so.conf.d/arrayfire.conf && \
+    ldconfig && \
+    git clone -b ${KHIVA_BRANCH} --depth 1  --recurse-submodules -j 8 https://github.com/shapelets/khiva.git && \
+    cd khiva && \
+    mkdir build && \
+    cd build && \
+    conan install .. --build missing && \
+    cmake .. \
+        -DCMAKE_BUILD_TYPE=Release \
+        -DCMAKE_INSTALL_PREFIX=/opt/khiva \
+        -DKHIVA_BUILD_TESTS=ON \
+        -DKHIVA_BUILD_BENCHMARKS=ON \
+        -DKHIVA_BUILD_EXAMPLES=OFF \
+        -DKHIVA_BUILD_DOCUMENTATION=OFF \
+        -DKHIVA_USE_CONAN=ON \
+        -DKHIVA_BUILD_C_BINDINGS=ON \
+        -DKHIVA_BUILD_JNI_BINDINGS=ON && \
+    cmake --build . --target install -- -j8
+
+FROM nvidia/cuda:10.1-runtime-ubuntu18.04 AS arrayfire-cuda
+COPY --from=arrayfire-cuda-builder /opt/arrayfire /opt/arrayfire
+RUN apt-get update && \
+    apt-get install -y --no-install-recommends \
+    libopenblas-base \
+    libfftw3-3 \
+    liblapacke && \
+    echo /opt/arrayfire/lib > /etc/ld.so.conf.d/arrayfire.conf && \
+    ldconfig && \
+    rm -rf /var/lib/apt/lists/* /var/tmp/* /tmp/*
+
+FROM arrayfire-cuda AS khiva-cuda
+ENV LD_LIBRARY_PATH="/opt/khiva/lib:${LD_LIBRARY_PATH}"
+COPY --from=khiva-cuda-builder /opt/khiva /opt/khiva
+RUN echo /opt/khiva/lib > /etc/ld.so.conf.d/khiva.conf && \
+    ldconfig
diff --git a/docker/cuda/docker-build.sh b/docker/cuda/docker-build.sh
@@ -0,0 +1,12 @@
+#! /usr/bin/env bash
+docker build --target khiva-cuda-builder-base -t $PUSH_REGISTRY/shapelets/khiva-cuda-builder-base:0.5.0 .
+docker build --target arrayfire-cuda-builder -t $PUSH_REGISTRY/shapelets/arrayfire-cuda-builder:3.6.2 .
+docker build --target khiva-cuda-builder --build-arg KHIVA_BRANCH=v0.5.0 -t $PUSH_REGISTRY/shapelets/khiva-cuda-builder:0.5.0 .
+docker run --gpus all --workdir /root/khiva/build $PUSH_REGISTRY/shapelets/khiva-cuda-builder:0.5.0 ctest --output-on-failure -j8
+docker build --target arrayfire-cuda -t $PUSH_REGISTRY/shapelets/arrayfire-cuda:3.6.2 .
+docker build --target khiva-cuda -t $PUSH_REGISTRY/shapelets/khiva-cuda:0.5.0 .
+docker push $PUSH_REGISTRY/shapelets/khiva-cuda-builder-base:0.5.0
+docker push $PUSH_REGISTRY/shapelets/arrayfire-cuda-builder:3.6.2
+docker push $PUSH_REGISTRY/shapelets/khiva-cuda-builder:0.5.0
+docker push $PUSH_REGISTRY/shapelets/arrayfire-cuda:3.6.2
+docker push $PUSH_REGISTRY/shapelets/khiva-cuda:0.5.0
diff --git a/docker/opencl/Dockerfile b/docker/opencl/Dockerfile
@@ -0,0 +1,90 @@
+FROM intelopencl/intel-opencl:ubuntu-18.04-ppa AS khiva-opencl-builder-base
+RUN apt-get update && \
+    apt-get install -y --no-install-recommends \
+    build-essential \
+    cmake \
+    git \
+    libboost-math-dev \
+    libfftw3-dev \
+    libfreeimage-dev \
+    liblapack-dev \
+    liblapacke-dev \
+    libopenblas-dev \
+    openjdk-8-jdk \
+    ocl-icd-opencl-dev \
+    python3-pip \
+    software-properties-common && \
+    pip3 install setuptools && \
+    pip3 install conan --upgrade && \
+    conan profile new --detect default && \
+    conan profile update settings.compiler.libcxx=libstdc++11 default && \
+    rm -rf /var/lib/apt/lists/* /var/tmp/* /tmp/*
+
+ENV CXX g++-7
+ENV CC gcc-7
+WORKDIR /root
+COPY *.patch ./
+
+# AF_DISABLE_GRAPHICS - Environment variable to disable graphics at
+# runtime due to lack of graphics support by docker - visit
+# http://arrayfire.org/docs/configuring_environment.htm#af_disable_graphics
+# for more information
+# For build instructions: https://github.com/arrayfire/arrayfire/wiki/Build-Instructions-for-Linux
+FROM khiva-opencl-builder-base AS arrayfire-opencl-builder
+ENV AF_DISABLE_GRAPHICS=1
+RUN git clone -b v3.6.2 --depth 1 --recurse-submodules -j 8 https://github.com/arrayfire/arrayfire.git && \
+    cd arrayfire && \
+    mkdir build && cd build && \
+    cmake .. -DCMAKE_INSTALL_PREFIX=/opt/arrayfire \
+             -DCMAKE_BUILD_TYPE=Release \
+             -DAF_BUILD_CPU=ON \
+             -DAF_BUILD_CUDA=OFF \
+             -DAF_BUILD_OPENCL=ON \
+             -DAF_BUILD_UNIFIED=ON \
+             -DAF_WITH_GRAPHICS=OFF \
+             -DAF_WITH_NONFREE=OFF \
+             -DAF_BUILD_EXAMPLES=OFF \
+             -DBUILD_TESTING=OFF \
+             -DAF_BUILD_DOCS=OFF \
+             -DAF_WITH_LOGGING=OFF \
+             -DAF_WITH_STATIC_FREEIMAGE=OFF && \
+    cmake --build . --target install -- -j8
+
+FROM khiva-opencl-builder-base AS khiva-builder
+ARG KHIVA_BRANCH=v0.5.0
+WORKDIR /root
+COPY --from=arrayfire-opencl-builder /opt/arrayfire /opt/arrayfire
+RUN echo /opt/arrayfire/lib > /etc/ld.so.conf.d/arrayfire.conf && \
+    ldconfig && \
+    git clone -b ${KHIVA_BRANCH} --depth 1 --recurse-submodules -j 8 https://github.com/shapelets/khiva.git && \
+    cd khiva && \
+    mkdir build && \
+    cd build && \
+    conan install .. --build missing && \
+    cmake .. -DCMAKE_BUILD_TYPE=Release \
+        -DCMAKE_INSTALL_PREFIX=/opt/khiva \
+        -DKHIVA_BUILD_TESTS=ON \
+        -DKHIVA_BUILD_BENCHMARKS=ON \
+        -DKHIVA_BUILD_EXAMPLES=OFF \
+        -DKHIVA_BUILD_DOCUMENTATION=OFF \
+        -DKHIVA_USE_CONAN=ON \
+        -DKHIVA_BUILD_C_BINDINGS=ON \
+        -DKHIVA_BUILD_JNI_BINDINGS=ON && \
+    cmake --build . --target install -- -j8
+
+FROM intelopencl/intel-opencl:ubuntu-18.04-ppa AS arrayfire-intel-opencl
+COPY --from=arrayfire-opencl-builder /opt/arrayfire /opt/arrayfire
+RUN apt-get update && \
+    apt-get install -y --no-install-recommends \
+    libopenblas-base \
+    libfftw3-3 \
+    liblapacke && \
+    echo /opt/arrayfire/lib > /etc/ld.so.conf.d/arrayfire.conf && \
+    ldconfig && \
+    rm -rf /var/lib/apt/lists/* /var/tmp/* /tmp/*
+
+FROM arrayfire-intel-opencl as khiva-intel-opencl
+ENV LD_LIBRARY_PATH="/opt/khiva/lib:${LD_LIBRARY_PATH}"
+COPY --from=khiva-builder /opt/khiva /opt/khiva
+RUN echo /opt/khiva/lib > /etc/ld.so.conf.d/khiva.conf && \
+    ldconfig
diff --git a/docker/opencl/docker-build.sh b/docker/opencl/docker-build.sh
@@ -0,0 +1,11 @@
+#! /usr/bin/env bash
+docker build --target khiva-opencl-builder-base -t $PUSH_REGISTRY/shapelets/khiva-opencl-builder-base:0.5.0 .
+docker build --target arrayfire-opencl-builder -t $PUSH_REGISTRY/shapelets/arrayfire-opencl-builder:3.6.2 .
+docker build --target khiva-builder --build-arg KHIVA_BRANCH=v0.5.0 -t $PUSH_REGISTRY/shapelets/khiva-builder:0.5.0 .
+docker build --target arrayfire-intel-opencl -t $PUSH_REGISTRY/shapelets/arrayfire-intel-opencl:3.6.2 .
+docker build --target khiva-intel-opencl -t $PUSH_REGISTRY/shapelets/khiva:0.5.0-opencl .
+docker push $PUSH_REGISTRY/shapelets/khiva-opencl-builder-base:0.5.0
+docker push $PUSH_REGISTRY/shapelets/arrayfire-opencl-builder:3.6.2
+docker push $PUSH_REGISTRY/shapelets/khiva-builder:0.5.0
+docker push $PUSH_REGISTRY/shapelets/arrayfire-intel-opencl:3.6.2
+docker push $PUSH_REGISTRY/shapelets/khiva:0.5.0-opencl