switch to libprima/prima

prima/.github/actions/spelling/allow.txt

@@ -2261,11 +2261,6 @@ TESTQUAD
 WAITALL
 xcodebuild
 ICX
-bglobal
-cglobal
-lglobal
-nglobal
-uglobal
 Belakovski
 allclose
 argmin
@@ -2288,7 +2283,6 @@ jth
 Kbreak
 mgh
 mmm
-multd
 nanargmax
 tenbars
 tfi

prima/.github/workflows/build_python.yml

@@ -82,7 +82,7 @@ jobs:
           fi
 
       - name: Build wheels
-        uses: pypa/cibuildwheel@v2.18.1
+        uses: pypa/cibuildwheel@v2.20.0
 
       - uses: actions/upload-artifact@v4
         with:

prima/CMakeLists.txt

@@ -8,6 +8,12 @@ option (BUILD_SHARED_LIBS "shared/static" ON)
 
 include (GNUInstallDirs)
 
+# the compiler enables an executable stack because of nested functions and this is fine
+if (CMAKE_Fortran_COMPILER_ID MATCHES "GNU" AND CMAKE_VERSION VERSION_GREATER_EQUAL 3.18)
+  include (CheckLinkerFlag)
+  check_linker_flag (Fortran "-Wl,--no-warn-execstack" HAVE_WARN_EXECSTACK)
+endif ()
+
 # Set additional Fortran compiler flags
 # 0. See https://cmake.org/cmake/help/latest/variable/CMAKE_LANG_COMPILER_ID.html for compiler IDs.
 # 1. We require the compilers to allocate arrays on the heap instead of the stack, which is

prima/LICENCE.txt

@@ -1,6 +1,6 @@
 BSD 3-Clause License
 
-Copyright (c) 2020--2024, Zaikun ZHANG ( https://www.zhangzk.net )
+Copyright (c) 2020--2025, Zaikun ZHANG ( https://www.zhangzk.net )
 
 Redistribution and use in source and binary forms, with or without
 modification, are permitted provided that the following conditions are met:

prima/pyprima/profiles_vs_matlab/.gitignore

@@ -0,0 +1,2 @@
+pycutest_cache_holder
+out

prima/pyprima/profiles_vs_matlab/README.md

@@ -0,0 +1,7 @@
+This folder contains scripts and utilities to run performance profiles of the PRIMA Python bindings against the PRIMA MATLAB bindings.
+
+In general we expect the performance profiles to show a straight line for both the output based and history based profiles since the underlying code is the same. However since there are bound to be some differences in how MATLAB and Python handle floating point arithmetic we expect to see a few cases where one might perform slightly "better" than the other.
+
+In order to use this you will need Python and MATLAB and in the MATLAB GUI you should have run setup.m from the root of the repo. If that has been completed you should be able to run the profiles with simply `python profiles.py`. By default no profiles will be run, so you need to specify which algorithm you'd like to run profiles for using any combination of `-b` for BOBYQA, `-c` for COBYLA, `-l` for LINCOA, `-n` for NEWUOA, and `-u` for UOBYQA. You can also use `-j#` to change the number of jobs used to run the problems. For example to run both UOBYQA and NEWUOA with 4 jobs, you would run `python profiles.py -nuj4`.
+
+It is not necessary to have a MATLAB window open to run the profiles. Each job will create an instance of the MATLAB engine for Python. Please note that this instance takes up about 500MB of memory so you may want to limit the number of jobs accordingly.

prima/pyprima/profiles_vs_matlab/bobyqa.txt

@@ -0,0 +1,220 @@
+AIRCRFTB
+AKIVA
+ALLINIT
+ALLINITU
+BARD
+BEALE
+BENNETT5LS
+BIGGS3
+BIGGS5
+BIGGS6
+BOX2
+BOX3
+BOXBODLS
+BRANIN
+BRKMCC
+BROWNBS
+BROWNDEN
+CAMEL6
+CERI651ALS
+CERI651BLS
+CERI651CLS
+CERI651DLS
+CERI651ELS
+CHWIRUT1LS
+CHWIRUT2LS
+CLIFF
+CLUSTERLS
+COOLHANSLS
+CUBE
+DANIWOODLS
+DANWOODLS
+DENSCHNA
+DENSCHNB
+DENSCHNC
+DENSCHND
+DENSCHNE
+DENSCHNF
+DEVGLA1
+DEVGLA1B
+DEVGLA2
+DEVGLA2B
+DGOSPEC
+DJTL
+ECKERLE4LS
+EG1
+EGGCRATE
+EGGCRATEB
+ELATVIDU
+ELATVIDUB
+ENGVAL2
+ENSOLS
+EXP2
+EXP2B
+EXPFIT
+FBRAIN2LS
+FBRAIN3LS
+FBRAINLS
+GAUSS1LS
+GAUSS2LS
+GAUSS3LS
+GAUSSIAN
+GBRAINLS
+GROWTHLS
+GULF
+HAHN1LS
+HAIRY
+HART6
+HATFLDA
+HATFLDB
+HATFLDD
+HATFLDE
+HATFLDFL
+HATFLDFLS
+HEART6LS
+HEART8LS
+HELIX
+HIELOW
+HILBERTA
+HILBERTB
+HIMMELBB
+HIMMELBCLS
+HIMMELBF
+HIMMELBG
+HIMMELBH
+HIMMELP1
+HS1
+HS110
+HS2
+HS25
+HS3
+HS38
+HS3MOD
+HS4
+HS45
+HS5
+HUMPS
+JENSMP
+JUDGE
+JUDGEB
+KIRBY2LS
+KOEBHELB
+KOWOSB
+LANCZOS1LS
+LANCZOS2LS
+LANCZOS3LS
+LEVYMONT10
+LEVYMONT5
+LEVYMONT6
+LEVYMONT7
+LEVYMONT8
+LEVYMONT9
+LOGHAIRY
+LOGROS
+LSC1LS
+LSC2LS
+MARATOSB
+MAXLIKA
+MDHOLE
+MEXHAT
+MEYER3
+MGH09LS
+MGH10LS
+MGH10SLS
+MGH17LS
+MGH17SLS
+MISRA1ALS
+MISRA1BLS
+MISRA1CLS
+MISRA1DLS
+NELSONLS
+OSBORNEA
+OSBORNEB
+OSLBQP
+PALMER1
+PALMER1A
+PALMER1B
+PALMER1C
+PALMER1D
+PALMER1E
+PALMER2
+PALMER2A
+PALMER2B
+PALMER2C
+PALMER2E
+PALMER3
+PALMER3A
+PALMER3B
+PALMER3C
+PALMER3E
+PALMER4
+PALMER4A
+PALMER4B
+PALMER4C
+PALMER4E
+PALMER5A
+PALMER5B
+PALMER5C
+PALMER5D
+PALMER5E
+PALMER6A
+PALMER6C
+PALMER6E
+PALMER7A
+PALMER7C
+PALMER7E
+PALMER8A
+PALMER8C
+PALMER8E
+PARKCH
+PFIT1LS
+PFIT2LS
+PFIT3LS
+PFIT4LS
+POWELLBSLS
+POWELLSQLS
+POWERSUM
+POWERSUMB
+PRICE3
+PRICE3B
+PRICE4
+PRICE4B
+PSPDOC
+QINGB
+RAT42LS
+RAT43LS
+RECIPELS
+ROSENBR
+ROSENBRTU
+ROSZMAN1LS
+S308
+S368
+SIM2BQP
+SIMBQP
+SINEVAL
+SISSER
+SNAIL
+SPECAN
+SSI
+STRATEC
+STREG
+STRTCHDV
+STRTCHDVB
+THURBERLS
+TRIGON1
+TRIGON1B
+TRIGON2
+TRIGON2B
+VESUVIALS
+VESUVIOLS
+VESUVIOULS
+VIBRBEAM
+WATSON
+WAYSEA1
+WAYSEA1B
+WAYSEA2
+WAYSEA2B
+WEEDS
+YFIT
+YFITU
+ZANGWIL2