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scilus / nf-scil Public

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[Module] Freesurfer synthregistration#54

Open

anroy1 wants to merge 34 commits intoscilus:mainscilus/nf-scil:mainfrom

anroy1:registrationanroy1/nf-scil:registrationCopy head branch name to clipboard

Conversation Commits34 (34)Checks Files changed

Open

[Module] Freesurfer synthregistration#54
anroy1 wants to merge 34 commits intoscilus:mainfrom
anroy1:registration

Commits

Commits on Sep 16, 2024

Change org_path
anroy1
committed
initial module commit
anroy1
committed
manage output format for ants and include init transform as output
anroy1
committed
quick fix
anroy1
committed
test fix 1
anroy1
committed
2nd fix for tests
anroy1
committed
quick fix
anroy1
committed
test naming fix
anroy1
committed
fix scilpy fetcher path
anroy1
committed
fix tests parameters
anroy1
committed
[WIP] modify module and test to manage freesurfer license
anroy1
committed
fix test data, freesurfer license
anroy1
committed
[WIP] improve test
anroy1
committed
Adjust nextflow config and output format
anroy1
committed
Swith transform format to freesurfer standard
anroy1
committed
run prettier
anroy1
committed
Remove license as module do not require it and update parameters with newer version
anroy1
committed
Switch transform output to fs .nii.gz format
anroy1
committed
Migrate tests to nf-tests
anroy1
committed
fix nf-tests
anroy1
committed
Remove pytests
anroy1
committed
Run prettier
anroy1
committed
Modify tests config for remote tests
anroy1
committed
Fix test assertion for name only
anroy1
committed
Rerun tests and fix linting
anroy1
committed
adjust process parameters for tests locally
anroy1
committed
[wip] fix alex comments 1/2
anroy1
committed
Add precisions regarding convertion on meta.yml
anroy1
committed
Handling threads in script
anroy1
committed
change container version
anroy1
committed
Use nifti md5sum assertion
anroy1
committed
test with niftiMD5SUM
anroy1
committed
Revert "Change org_path"
anroy1
committed

Commits on Sep 17, 2024

fix test
anroy1
committed

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