Skip to content

Linting/tests #117

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Merged
chamel3 merged 2 commits into from
Aug 5, 2025
Merged

Linting/tests #117

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
2 commits
Select commit Hold shift + click to select a range
6e0ade2
linting for tests on data and domains
chamel3 Aug 5, 2025
904b580
some linting on certain parts of the unit tests.
chamel3 Aug 5, 2025
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
8 changes: 4 additions & 4 deletions test/data/test_full_field_data.py
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -3,8 +3,8 @@ def test_full_field_data():
from pathlib import Path
import os
data_file = os.path.join(Path(__file__).parent, 'data_full_field.csv')
data = FullFieldData(
data_file,
FullFieldData(
data_file,
input_keys=['x', 'y', 'z', 't'],
output_keys=['u_x', 'u_y', 'u_z']
)
Expand All @@ -13,8 +13,8 @@ def test_full_field_data():
# def test_full_field_data_plot_registration():
# data_file = os.path.join(Path(__file__).parent, 'data_full_field.csv')
# data = FullFieldData(
# data_file,
# data_file,
# input_keys=['x', 'y', 'z', 't'],
# output_keys=['u_x', 'u_y', 'u_z']
# )
# data.plot_e
# data.plot_e
36 changes: 20 additions & 16 deletions test/data/test_global_data.py
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -10,8 +10,8 @@ def test_global_data():
import os
data_file = os.path.join(Path(__file__).parent, 'data_global.csv')
mesh_file = os.path.join(Path(__file__).parent, 'mesh.g')
data = GlobalData(
data_file,
GlobalData(
data_file,
times_key='t',
disp_key='u_x',
force_key='f_x',
Expand All @@ -20,8 +20,8 @@ def test_global_data():
reaction_dof='x',
n_time_steps=11
)
data = GlobalData(
data_file,
GlobalData(
data_file,
times_key='t',
disp_key='u_x',
force_key='f_x',
Expand All @@ -30,8 +30,8 @@ def test_global_data():
reaction_dof='y',
n_time_steps=11
)
data = GlobalData(
data_file,
GlobalData(
data_file,
times_key='t',
disp_key='u_x',
force_key='f_x',
Expand All @@ -49,8 +49,8 @@ def test_global_data_with_plotting():
import os
data_file = os.path.join(Path(__file__).parent, 'data_global.csv')
mesh_file = os.path.join(Path(__file__).parent, 'mesh.g')
data = GlobalData(
data_file,
GlobalData(
data_file,
times_key='t',
disp_key='u_x',
force_key='f_x',
Expand All @@ -69,8 +69,8 @@ def test_global_data_bad_reaction_dof():
data_file = os.path.join(Path(__file__).parent, 'data_global.csv')
mesh_file = os.path.join(Path(__file__).parent, 'mesh.g')
with pytest.raises(ValueError):
data = GlobalData(
data_file,
GlobalData(
data_file,
times_key='t',
disp_key='u_x',
force_key='f_x',
Expand All @@ -87,11 +87,13 @@ def test_global_data_times_not_unique_exception():
GlobalDataTimesNotUniqueException
from pathlib import Path
import os
data_file = os.path.join(Path(__file__).parent, 'data_global_not_unique.csv')
data_file = os.path.join(
Path(__file__).parent, 'data_global_not_unique.csv'
)
mesh_file = os.path.join(Path(__file__).parent, 'mesh.g')
with pytest.raises(GlobalDataTimesNotUniqueException):
data = GlobalData(
data_file,
GlobalData(
data_file,
times_key='t',
disp_key='u_x',
force_key='f_x',
Expand All @@ -108,11 +110,13 @@ def test_global_data_times_not_strictly_increasing():
GlobalDataTimesNotStrictlyIncreasingException
from pathlib import Path
import os
data_file = os.path.join(Path(__file__).parent, 'data_global_not_strictly_increasing.csv')
data_file = os.path.join(
Path(__file__).parent, 'data_global_not_strictly_increasing.csv'
)
mesh_file = os.path.join(Path(__file__).parent, 'mesh.g')
with pytest.raises(GlobalDataTimesNotStrictlyIncreasingException):
data = GlobalData(
data_file,
GlobalData(
data_file,
times_key='t',
disp_key='u_x',
force_key='f_x',
Expand Down
2 changes: 1 addition & 1 deletion test/domains/test_base.py
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -8,7 +8,7 @@ def test_simulation_times_unique_exception():
import pytest
mesh_file = os.path.join(Path(__file__).parent, 'mesh.g')
times = jnp.array([0., 0.])

with pytest.raises(SimulationTimesNotUniqueException):
BaseDomain(mesh_file, times)

Expand Down
4 changes: 2 additions & 2 deletions test/domains/test_collocation_domain.py
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -5,7 +5,7 @@ def test_collocation_domain_3D():
import os
mesh_file = os.path.join(Path(__file__).parent, 'mesh.g')
times = jnp.linspace(0., 1.0, 2)
domain = CollocationDomain(mesh_file, times)
CollocationDomain(mesh_file, times)


def test_collocation_domain_tri3_p_order():
Expand All @@ -15,4 +15,4 @@ def test_collocation_domain_tri3_p_order():
import os
mesh_file = os.path.join(Path(__file__).parent, 'mesh_10x.g')
times = jnp.linspace(0., 1.0, 2)
domain = CollocationDomain(mesh_file, times, p_order=2)
CollocationDomain(mesh_file, times, p_order=2)
7 changes: 4 additions & 3 deletions test/domains/test_delta_pinn_domain.py
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -16,10 +16,11 @@ def test_forward_domain():
# natural_bcs = [
# ]
# physics = SolidMechanics(
# mesh_file, essential_bc_func,
# mesh_file, essential_bc_func,
# NeoHookean(), ThreeDimensional(),
# use_delta_pinn=True
# )
times = jnp.linspace(0., 1.0, 2)
# domain = DeltaPINNDomain(physics, essential_bcs, natural_bcs, mesh_file, times, 20)
domain = DeltaPINNDomain(mesh_file, times, n_eigen_values=100)
# domain = DeltaPINNDomain(
# physics, essential_bcs, natural_bcs, mesh_file, times, 20)
DeltaPINNDomain(mesh_file, times, n_eigen_values=100)
9 changes: 5 additions & 4 deletions test/domains/test_inverse_domain.py
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -7,7 +7,8 @@


# def test_inverse_domain():
# field_data_file = os.path.join(Path(__file__).parent, 'data_full_field.csv')
# field_data_file = os.path.join(
# Path(__file__).parent, 'data_full_field.csv')
# global_data_file = os.path.join(Path(__file__).parent, 'data_global.csv')
# mesh_file = os.path.join(Path(__file__).parent, 'mesh.g')
# essential_bc_func = lambda x, t, z: z
Expand All @@ -22,16 +23,16 @@
# natural_bcs = [
# ]
# physics = SolidMechanics(
# mesh_file, essential_bc_func,
# mesh_file, essential_bc_func,
# NeoHookean(), ThreeDimensional()
# )
# full_field_data = FullFieldData(
# field_data_file,
# field_data_file,
# input_keys=['x', 'y', 'z', 't'],
# output_keys=['u_x', 'u_y', 'u_z']
# )
# global_data = GlobalData(
# global_data_file,
# global_data_file,
# times_key='t',
# disp_key='u_x',
# force_key='f_x',
Expand Down
4 changes: 2 additions & 2 deletions test/domains/test_variational_domain.py
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -5,7 +5,7 @@ def test_forward_domain():
import os
mesh_file = os.path.join(Path(__file__).parent, 'mesh.g')
times = jnp.linspace(0., 1.0, 2)
domain = VariationalDomain(mesh_file, times)
VariationalDomain(mesh_file, times)


def test_forward_domain_tri3_p_order():
Expand All @@ -15,4 +15,4 @@ def test_forward_domain_tri3_p_order():
import os
mesh_file = os.path.join(Path(__file__).parent, 'mesh_10x.g')
times = jnp.linspace(0., 1.0, 2)
domain = VariationalDomain(mesh_file, times, p_order=2)
VariationalDomain(mesh_file, times, p_order=2)
Loading
Loading