service.legacy: log messages + trivial fixes

saezlab · Jan 28, 2025 · 209135d · 209135d
1 parent 9fd946d
commit 209135d
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Showing 3 changed files with 9 additions and 2 deletions.
diff --git a/omnipath_server/server/_legacy.py b/omnipath_server/server/_legacy.py
@@ -15,6 +15,7 @@
 
 from sanic import Sanic, Request, response
 
+from .. import _log
 from ..service import LegacyService
 
 __all__ = [
@@ -24,6 +25,7 @@
 
 def create_server(**kwargs):
 
+    _log('Creating new legacy server...')
     legacy_server = Sanic('LegacyServer')
     legacy_server.ctx.service = LegacyService(**kwargs)
 
@@ -42,4 +44,6 @@ async def legacy_handler(request: Request, path: str):
         return response.text(f'No such path: {path}', status = 404)
 
 
+    _log('Legacy server ready.')
+
     return legacy_server
diff --git a/omnipath_server/server/_main.py b/omnipath_server/server/_main.py
@@ -24,6 +24,7 @@
 
 DOMAINS = {
     'legacy': ('next.omnipathdb.org', 'omnipathdb.org'),
+    'metabo': ('metabo.omnipathdb.org'),
 }
 
 SERVERS = {}

diff --git a/omnipath_server/service/_legacy.py b/omnipath_server/service/_legacy.py
@@ -766,6 +766,8 @@ def __init__(
 
         # _log(f'{self.__class__.__name__} startup ready.')
 
+        self._connect(con)
+
 
     def _connect(
             self,
@@ -783,7 +785,7 @@ def _connect(
                         override = con.get(param, None),
                         default = default,
                     )
-                for param, default in _connection.DEFAULTS
+                for param, default in _connection.DEFAULTS.items()
             }
 
         self.con = _connection.ensure_con(con)
@@ -1366,7 +1368,7 @@ def _where(self, query: Query, args: dict, param: dict) -> Query:
 
                 value = self._parse_arg(value)
                 col, *op = _misc.to_tuple(col_op)
-                col = query.statment.columns[col]
+                col = query.statement.columns[col]
                 op = self._where_op(op, col, value)
                 where_expr = getattr(col, op)(value)
                 query = query.filter(where_expr)