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working on small reviewer changes #107

working on small reviewer changes

working on small reviewer changes #107

Triggered via push December 31, 2024 17:01
Status Failure
Total duration 59m 31s
Artifacts 5

R-CMD-check.yaml

on: push
Matrix: R-CMD-check
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11 errors and 52 warnings
macos-latest (release)
R CMD check found ERRORs
macos-latest (release)
Process completed with exit code 1.
macos-latest (release)
No such keg: /opt/homebrew/Cellar/[email protected]
ubuntu-latest (devel)
R CMD check found ERRORs
ubuntu-latest (devel)
Process completed with exit code 1.
ubuntu-latest (release)
R CMD check found ERRORs
ubuntu-latest (release)
Process completed with exit code 1.
ubuntu-latest (oldrel-1)
R CMD check found ERRORs
ubuntu-latest (oldrel-1)
Process completed with exit code 1.
windows-latest (release)
R CMD check found ERRORs
windows-latest (release)
Process completed with exit code 1.
macos-latest (release)
Codoc mismatches from Rd file 'jointModel.Rd':
macos-latest (release)
There were 46 divergent transitions after warmup. See
macos-latest (release)
There were 2454 transitions after warmup that exceeded the maximum treedepth. Increase max_treedepth above 10. See
macos-latest (release)
There were 1 chains where the estimated Bayesian Fraction of Missing Information was low. See
macos-latest (release)
Examine the pairs() plot to diagnose sampling problems
macos-latest (release)
The largest R-hat is 1.33, indicating chains have not mixed.
macos-latest (release)
Bulk Effective Samples Size (ESS) is too low, indicating posterior means and medians may be unreliable.
macos-latest (release)
Tail Effective Samples Size (ESS) is too low, indicating posterior variances and tail quantiles may be unreliable.
macos-latest (release)
There are 12 divergent transitions in your model fit.
macos-latest (release)
There are 40 divergent transitions in your model fit.
macos-latest (release)
pkgconf 2.3.0_1 is already installed and up-to-date. To reinstall 2.3.0_1, run: brew reinstall pkgconf
macos-latest (release)
HOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK is set: not checking for outdated dependents or dependents with broken linkage!
ubuntu-latest (devel)
Codoc mismatches from Rd file 'jointModel.Rd':
ubuntu-latest (devel)
There were 54 divergent transitions after warmup. See
ubuntu-latest (devel)
There were 2446 transitions after warmup that exceeded the maximum treedepth. Increase max_treedepth above 10. See
ubuntu-latest (devel)
There were 1 chains where the estimated Bayesian Fraction of Missing Information was low. See
ubuntu-latest (devel)
Examine the pairs() plot to diagnose sampling problems
ubuntu-latest (devel)
The largest R-hat is 1.27, indicating chains have not mixed.
ubuntu-latest (devel)
Bulk Effective Samples Size (ESS) is too low, indicating posterior means and medians may be unreliable.
ubuntu-latest (devel)
Tail Effective Samples Size (ESS) is too low, indicating posterior variances and tail quantiles may be unreliable.
ubuntu-latest (devel)
There are 12 divergent transitions in your model fit.
ubuntu-latest (devel)
There are 40 divergent transitions in your model fit.
ubuntu-latest (release)
Codoc mismatches from Rd file 'jointModel.Rd':
ubuntu-latest (release)
There were 54 divergent transitions after warmup. See
ubuntu-latest (release)
There were 2446 transitions after warmup that exceeded the maximum treedepth. Increase max_treedepth above 10. See
ubuntu-latest (release)
There were 1 chains where the estimated Bayesian Fraction of Missing Information was low. See
ubuntu-latest (release)
Examine the pairs() plot to diagnose sampling problems
ubuntu-latest (release)
The largest R-hat is 1.27, indicating chains have not mixed.
ubuntu-latest (release)
Bulk Effective Samples Size (ESS) is too low, indicating posterior means and medians may be unreliable.
ubuntu-latest (release)
Tail Effective Samples Size (ESS) is too low, indicating posterior variances and tail quantiles may be unreliable.
ubuntu-latest (release)
There are 12 divergent transitions in your model fit.
ubuntu-latest (release)
There are 40 divergent transitions in your model fit.
ubuntu-latest (oldrel-1)
Codoc mismatches from documentation object 'jointModel':
ubuntu-latest (oldrel-1)
There were 54 divergent transitions after warmup. See
ubuntu-latest (oldrel-1)
There were 2446 transitions after warmup that exceeded the maximum treedepth. Increase max_treedepth above 10. See
ubuntu-latest (oldrel-1)
There were 1 chains where the estimated Bayesian Fraction of Missing Information was low. See
ubuntu-latest (oldrel-1)
Examine the pairs() plot to diagnose sampling problems
ubuntu-latest (oldrel-1)
The largest R-hat is 1.27, indicating chains have not mixed.
ubuntu-latest (oldrel-1)
Bulk Effective Samples Size (ESS) is too low, indicating posterior means and medians may be unreliable.
ubuntu-latest (oldrel-1)
Tail Effective Samples Size (ESS) is too low, indicating posterior variances and tail quantiles may be unreliable.
ubuntu-latest (oldrel-1)
There are 12 divergent transitions in your model fit.
ubuntu-latest (oldrel-1)
There are 40 divergent transitions in your model fit.
windows-latest (release)
file 'eDNAjoint/configure' did not have execute permissions: corrected
windows-latest (release)
Codoc mismatches from Rd file 'jointModel.Rd':
windows-latest (release)
There were 46 divergent transitions after warmup. See
windows-latest (release)
There were 2454 transitions after warmup that exceeded the maximum treedepth. Increase max_treedepth above 10. See
windows-latest (release)
There were 1 chains where the estimated Bayesian Fraction of Missing Information was low. See
windows-latest (release)
Examine the pairs() plot to diagnose sampling problems
windows-latest (release)
The largest R-hat is 1.33, indicating chains have not mixed.
windows-latest (release)
Bulk Effective Samples Size (ESS) is too low, indicating posterior means and medians may be unreliable.
windows-latest (release)
Tail Effective Samples Size (ESS) is too low, indicating posterior variances and tail quantiles may be unreliable.
windows-latest (release)
There are 12 divergent transitions in your model fit.

Artifacts

Produced during runtime
Name Size
Linux-X64-rdevel-2-results
148 MB
Linux-X64-roldrel-1-4-results
147 MB
Linux-X64-rrelease-3-results
147 MB
Windows-X64-rrelease-1-results
13.5 MB
macOS-ARM64-rrelease-0-results
38.1 MB