[GSoC 2025] Load model JSON files from URLs #5137

medha-14 · 2025-07-29T19:02:45Z

Description

This PR is based on #5056 and contains changes that build upon it.
Once #5056 is merged, the diff for this PR will automatically update to show only the relevant changes.

Type of change

Please add a line in the relevant section of CHANGELOG.md to document the change (include PR #)

Important checks:

Please confirm the following before marking the PR as ready for review:

No style issues: nox -s pre-commit
All tests pass: nox -s tests
The documentation builds: nox -s doctests
Code is commented for hard-to-understand areas
Tests added that prove fix is effective or that feature works

medha-14 · 2025-07-29T19:08:01Z

I've updated the entry_points.py so that models can now be loaded directly from a URL. This is how it is working at the moment.

import pybamm
url = "https://raw.githubusercontent.com/medha-14/model_json/refs/heads/main/dfn.json"
model =  pybamm.Model(url = url,battery_model=pybamm.lithium_ion.BaseModel())
sim = pybamm.Simulation(model)
sim.solve([0, 3600])
sim.plot(show_plot=False)

Please let me know if any part of this approach needs changing or improvisation.

Saransh-cpp · 2025-07-30T13:17:24Z

@medha-14 can you change the base branch here? Would be much easier to review

agriyakhetarpal · 2025-07-31T00:27:28Z

src/pybamm/dispatch/entry_points.py

+def get_cache_path(url):
+    cache_dir = Path.home() / ".pybamm_cache" / "pybamm" / "models"
+    cache_dir.mkdir(parents=True, exist_ok=True)
+    file_hash = hashlib.md5(url.encode()).hexdigest()
+    return cache_dir / f"{file_hash}.json"
+
+
+def clear_model_cache():
+    cache_dir = Path.home() / ".pybamm_cache" / "pybamm" / "models"
+    if cache_dir.exists():
+        for file in cache_dir.glob("*.json"):
+            file.unlink()


This should be handled using platformdirs.user_cache_dir: https://platformdirs.readthedocs.io/en/latest/api.html#cache-directory

agriyakhetarpal · 2025-08-04T19:50:26Z

@medha-14 can you change the base branch here? Would be much easier to review

Hi @medha-14, could you please create a PR within your fork from this link? medha-14/PyBaMM@GSoC...medha-14:PyBaMM:load_json_from_url. I see a better diff there. We could add comments on that PR until #5056 is merged. Otherwise, I think it is on the right track, modulo that we need to use platformdirs and we need tests.

codecov · 2025-08-19T21:30:14Z

Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 98.86%. Comparing base (a1aa02c) to head (c39d1c0).

Additional details and impacted files

@@             Coverage Diff             @@
##           develop    #5137      +/-   ##
===========================================
- Coverage    98.88%   98.86%   -0.03%     
===========================================
  Files          320      320              
  Lines        26949    26988      +39     
===========================================
+ Hits         26648    26681      +33     
- Misses         301      307       +6

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agriyakhetarpal · 2025-09-03T12:04:21Z

src/pybamm/dispatch/entry_points.py

+from pybamm.expression_tree.operations.serialise import Serialise
+
+APP_NAME = "pybamm"
+APP_AUTHOR = "pybamm"


I think we can keep just APP_NAME and drop APP_AUTHOR, and we can set Path(user_cache_dir(APP_NAME)) / "models" as a constant here instead.

agriyakhetarpal · 2025-09-03T12:08:22Z

src/pybamm/dispatch/entry_points.py

+def get_cache_path(url: str) -> Path:
+    cache_dir = _get_cache_dir()
+    file_hash = hashlib.md5(url.encode()).hexdigest()
+    return cache_dir / f"{file_hash}.json"


Why MD5 and not SHA-256? :)

agriyakhetarpal · 2025-09-03T12:08:41Z

src/pybamm/dispatch/entry_points.py

+        try:
+            file.unlink()
+        except Exception as e:
+            # Optional: log error instead of failing silently


Suggested change

# Optional: log error instead of failing silently

agriyakhetarpal · 2025-09-03T12:14:04Z

src/pybamm/dispatch/entry_points.py

+def clear_model_cache() -> None:
+    cache_dir = _get_cache_dir()
+    for file in cache_dir.glob("*.json"):
+        try:
+            file.unlink()
+        except Exception as e:


Note, we also store some of PyBaMM's data files in the cache dir using a pooch registry:

PyBaMM/src/pybamm/pybamm_data.py

Lines 126 to 139 in a1aa02c

def get_data(self, filename: str):

"""

Fetches the data file from upstream and stores it in the local cache directory under pybamm directory.

Parameters

----------

filename : str

Name of the data file to be fetched from the registry.

Returns

-------

pathlib.PurePath

"""

self.registry.fetch(filename)

return pathlib.Path(f"{self.path}/{self.version}/{filename}")

I wonder if we could reuse some of the code here, because clearing the cache directory of JSON files could have unintended side effects. We do have JSON files there: https://github.com/pybamm-team/pybamm-data/releases/tag/v1.0.1

Could we perhaps rewrite the PR to use pooch instead? That will also provide safer defaults than using urllib.request.urlretrieve() directly, and we could rely on it for the checksum/caching bits to see if we need to download the model JSON again or not.

agriyakhetarpal · 2025-09-03T12:14:26Z

src/pybamm/dispatch/entry_points.py

+def Model(
+    model=None,
+    url=None,
+    force_download=False,
+    *args,
+    **kwargs,
+):


I think we can have better typing here.

load json from web

f55a0a9

medha-14 requested a review from a team as a code owner July 29, 2025 19:02

agriyakhetarpal reviewed Jul 31, 2025

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santacodes added the GSoC 2025 Items being done as part of GSoC 2025 label Aug 1, 2025

agriyakhetarpal mentioned this pull request Aug 4, 2025

[GSOC 2025] Saving and Loading Parameter Sets #5134

Closed

medha-14 and others added 5 commits August 5, 2025 13:50

Merge branch 'develop' into load_json_from_url

0b3d671

Merge branch 'develop' into load_json_from_url

6ee08b0

Merge remote-tracking branch 'origin/GSoC' into load_json_from_url

5112f8b

using cache_dir

ed0c714

tests

3e3658b

coverage fix

fc437a1

agriyakhetarpal marked this pull request as draft August 22, 2025 00:02

Merge branch 'develop' into load_json_from_url

00ff44f

agriyakhetarpal changed the title ~~[GSOC 2025] Load model JSON files from URLs~~ [GSoC 2025] Load model JSON files from URLs Aug 27, 2025

medha-14 and others added 2 commits August 31, 2025 15:00

coverage fix

4214681

Merge branch 'develop' into load_json_from_url

71ae0c4

medha-14 marked this pull request as ready for review August 31, 2025 09:32

medha-14 and others added 2 commits September 3, 2025 16:11

url fix

51bf407

Merge branch 'develop' into load_json_from_url

c39d1c0

agriyakhetarpal requested review from Saransh-cpp, agriyakhetarpal and santacodes September 3, 2025 11:56

agriyakhetarpal requested changes Sep 3, 2025

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[GSoC 2025] Load model JSON files from URLs #5137

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	def get_data(self, filename: str):
	"""
	Fetches the data file from upstream and stores it in the local cache directory under pybamm directory.

	Parameters
	----------
	filename : str
	Name of the data file to be fetched from the registry.
	Returns
	-------
	pathlib.PurePath
	"""
	self.registry.fetch(filename)
	return pathlib.Path(f"{self.path}/{self.version}/{filename}")

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medha-14 commented Jul 29, 2025

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