GitHub - pnucolab/SSAM-SpatialData

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Name	Name	Last commit message	Last commit date
Latest commit Kwakyejin #run ipynb Sep 9, 2024 b2f3d77 · Sep 9, 2024 History 4 Commits
Readme.txt	Readme.txt	#first commit	Sep 8, 2024
download.py	download.py	#first commit	Sep 8, 2024
to_zarr.py	to_zarr.py	#run ipynb	Sep 9, 2024
to_zarr_with_plots.ipynb	to_zarr_with_plots.ipynb	#run ipynb	Sep 9, 2024

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The converter requires at least the following packages:
- spatialdata
- pandas
- numpy
- matplotlib
- h5py
- ssam  
- loompy
- sklearn
- scipy
- skimage
- scanpy