Releases: paulsengroup/NCHG
Releases · paulsengroup/NCHG
v0.0.2
v0.0.1
What's Changed
- Fix windows builds by @robomics in #2
- Improve performance of CI by @robomics in #3
- Enable codecov CI by @robomics in #4
- Support computing statistical significance for interactions overlapping arbitrary 2D domains by @robomics in #1
- Make NCHG compute multithreaded by @robomics in #6
- Various bugfixes by @robomics in #7
- Expand integration test suite used by CI by @robomics in #8
- Add --expected-values option to NCHG compute by @robomics in #9
- Various minor improvements by @robomics in #10
- Implement NCHG filter --sorted by @robomics in #11
- Properly deal with non-finite values in NCHG filter by @robomics in #12
- Bump dependencies by @robomics in #13
- Maintenance by @robomics in #15
- Implement MAD-max filtering by @robomics in #14
- Do not bother testing domains with 0 observed interactions by @robomics in #17
- Use different cache scopes when building x86 and ARM docker images by @robomics in #18
- Add options --correct-pvals-chrom-by-chrom and --correct-pvals-cis-trans by @robomics in #16
- Improve estimation of the expected values profile by @robomics in #19
- Optimize IO by @robomics in #20
- Bump dependencies by @robomics in #21
- Performance optimization by @robomics in #22
- Fix bug in NCHG filter by @robomics in #23
- Support computing the expected values for cis/trans-only by @robomics in #24
- Support specifying custom bin masks by @robomics in #26
- Avoid needlessly computing cis expected values by @robomics in #25
- Bump docker/build-push-action from 5 to 6 by @dependabot in #27
- Fix bug in NCHG compute by @robomics in #29
- Improve error message when expected value file is lacking data for chrom pair by @robomics in #30
- Workaround spurious failures when spawning child processes by @robomics in #28
- Various minor bugfix by @robomics in #31
- Change how the log ratio is computed by @robomics in #32
New Contributors
- @robomics made their first contribution in #2
- @dependabot made their first contribution in #27
Full Changelog: https://github.com/paulsengroup/NCHG/commits/v0.0.1
Contributors
dependabot and robomics