Repositories list

• GlimmaV2

  Public
  interactive plots for differential expression analysis

  rdifferential-expressioninteractive-visualizations

  rdifferential-expressioninteractive-visualizations

  JavaScript

  •

  GNU Lesser General Public License v3.0

  •99 forks•3535 stars•44 issues•00 pull requests•Updated Apr 30, 2026Apr 30, 2026

• FLAMES

  Public
  A framework for performing single-cell and bulk read full-length analysis of mutations and splicing.

  C

  •

  GNU General Public License v3.0

  •1212 forks•6060 stars•1212 issues•00 pull requests•Updated Apr 22, 2026Apr 22, 2026

• long_read_tools

  Public
  A catalogue of available long read sequencing data analysis tools

  JavaScript

  •

  MIT License

  •1818 forks•8585 stars•00 issues•00 pull requests•Updated Jan 6, 2026Jan 6, 2026

• restrander

  Public
  C++

  •

  MIT License

  •33 forks•1414 stars•55 issues•11 pull request•Updated Dec 22, 2025Dec 22, 2025

• LongMod123

  Public
  TeX

  •

  Apache License 2.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Dec 11, 2025Dec 11, 2025

• stPipe

  Public
  R

  •

  MIT License

  •00 forks•55 stars•00 issues•00 pull requests•Updated Nov 18, 2025Nov 18, 2025

• open-data-registry

  Public
  A registry of publicly available datasets on AWS

  Python

  •

  Apache License 2.0

  •1.1k1.1k forks•00 stars•00 issues•00 pull requests•Updated Oct 31, 2025Oct 31, 2025

• LongBench.io

  Public
  HTML

  •11 fork•33 stars•11 issue•00 pull requests•Updated Sep 26, 2025Sep 26, 2025

• mritchielab.github.io

  Public
  SCSS

  •00 forks•00 stars•00 issues•00 pull requests•Updated Aug 16, 2025Aug 16, 2025

• SpatialBenchVisium

  Public
  R

  •

  MIT License

  •11 fork•88 stars•00 issues•00 pull requests•Updated Jul 29, 2025Jul 29, 2025

• quartet_rna_project

  Public
  Image for RNA modification of direct RNA-seq data, using dorado and modkit; built using apptainer

  MIT License

  •00 forks•00 stars•00 issues•00 pull requests•Updated Apr 19, 2025Apr 19, 2025