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    • This code was used to analyze bulk RNAseq from early brain organoid data in the scope of the Alexander project.
      R
      β€’0β€’0β€’0β€’0β€’Updated Dec 1, 2025Dec 1, 2025
    • Workflow analysis for TOMOSeq data from trout 0 hpf (freshly fertilized egg/zygote), 1 hpf (early cleavage stage), 1 dpf (early blastula stage, ~32-64 cells), a…
      R
      β€’0β€’1β€’0β€’0β€’Updated Nov 20, 2025Nov 20, 2025
    • Codebase for the paper Zucha et al. titled "Spatiotemporal transcriptomic map of glial cell response in mouse model of acute brain ischemia"
      R
      β€’3β€’16β€’0β€’0β€’Updated Oct 23, 2024Oct 23, 2024
    • This is the code that was used to analyze two scRNA-seq datasets - co-culture and organoid model of Alexander disease.
      R
      β€’0β€’0β€’0β€’0β€’Updated Oct 11, 2024Oct 11, 2024
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