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update workflow.sh to work with two subset_mesh options #93

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Merged
FariborzDaneshvar-NOAA merged 1 commit into from
Apr 7, 2025
Merged

update workflow.sh to work with two subset_mesh options #93

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48 changes: 27 additions & 21 deletions stormworkflow/scripts/workflow.sh
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Original file line number Diff line number Diff line change
Expand Up @@ -82,34 +82,40 @@ hurricane_data \


MESH_KWDS=""
if [ $subset_mesh == 1 ]; then
if [ $subset_mesh == 0 ]; then
echo "Copy high-res mesh..."
cp "$L_MESH_HI" $run_dir/mesh/mesh_w_bdry.grd

elif [ $subset_mesh == 1 ]; then
echo "Subset mesh..."
MESH_KWDS+="subset_n_combine"
MESH_KWDS+=" $L_MESH_HI"
MESH_KWDS+=" $L_MESH_LO"
MESH_KWDS+=" ${run_dir}/windswath"
MESH_KWDS+=" --rasters $L_DEM_LO"
MESH_KWDS+=" --out ${run_dir}/mesh"

export MESH_KWDS
sbatch \
--output "${run_dir}/output/slurm-%j.mesh.out" \
--wait \
--export=ALL,MESH_KWDS,STORM=$storm,YEAR=$year \
$run_dir/slurm/mesh.sbatch
else
# TODO: Get param_* values from somewhere
MESH_KWDS+="hurricane_mesh"
MESH_KWDS+=" --hmax $param_mesh_hmax"
MESH_KWDS+=" --hmin-low $param_mesh_hmin_low"
MESH_KWDS+=" --rate-low $param_mesh_rate_low"
MESH_KWDS+=" --transition-elev $param_mesh_trans_elev"
MESH_KWDS+=" --hmin-high $param_mesh_hmin_high"
MESH_KWDS+=" --rate-high $param_mesh_rate_high"
MESH_KWDS+=" --shapes-dir $L_SHP_DIR"
MESH_KWDS+=" --windswath ${run_dir}/windswath"
MESH_KWDS+=" --lo-dem $L_DEM_LO"
MESH_KWDS+=" --hi-dem $L_DEM_HI"
echo "InputError! subset_mesh should be 0 or 1"
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@SorooshMani-NOAA SorooshMani-NOAA Apr 7, 2025

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Ideally it should error out at this point, but that's not a huge issue

# # TODO: Get param_* values from somewhere
# MESH_KWDS+="hurricane_mesh"
# MESH_KWDS+=" --hmax $param_mesh_hmax"
# MESH_KWDS+=" --hmin-low $param_mesh_hmin_low"
# MESH_KWDS+=" --rate-low $param_mesh_rate_low"
# MESH_KWDS+=" --transition-elev $param_mesh_trans_elev"
# MESH_KWDS+=" --hmin-high $param_mesh_hmin_high"
# MESH_KWDS+=" --rate-high $param_mesh_rate_high"
# MESH_KWDS+=" --shapes-dir $L_SHP_DIR"
# MESH_KWDS+=" --windswath ${run_dir}/windswath"
# MESH_KWDS+=" --lo-dem $L_DEM_LO"
# MESH_KWDS+=" --hi-dem $L_DEM_HI"
fi
MESH_KWDS+=" --out ${run_dir}/mesh"
export MESH_KWDS
sbatch \
--output "${run_dir}/output/slurm-%j.mesh.out" \
--wait \
--job-name=mesh_$tag \
--export=ALL,MESH_KWDS,STORM=$storm,YEAR=$year \
$run_dir/slurm/mesh.sbatch


echo "Download necessary data..."
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