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reduce vignette fig sizes; add a memcheck workflow for c++ checks
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Nicholas Clark
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May 9, 2024
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^tests/mvgam_examples\.R$ | ||
^tests/testthat/Rplots\.pdf$ | ||
^tests/local$ | ||
^memcheck\.R$ |
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# Workflow derived from https://github.com/r-lib/actions/tree/master/examples | ||
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help | ||
on: | ||
push: | ||
branches: [main, master] | ||
pull_request: | ||
branches: [main, master] | ||
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name: memcheck | ||
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jobs: | ||
memcheck: | ||
runs-on: ubuntu-latest | ||
env: | ||
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | ||
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steps: | ||
- uses: actions/checkout@v2 | ||
- uses: n1hility/cancel-previous-runs@v2 | ||
with: | ||
token: ${{ secrets.GITHUB_TOKEN }} | ||
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- uses: actions/checkout@v2 | ||
- name: apt install dependency | ||
run: | | ||
sudo apt-get -y install valgrind | ||
- uses: r-lib/actions/setup-r@v2 | ||
with: | ||
use-public-rspm: true | ||
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# As cmdstanr is not yet on CRAN, configure the action to only install the | ||
# 'Depends' packages by default and then manually specify the 'Suggests' | ||
# packages that are needed for R CMD CHECK | ||
- uses: r-lib/actions/setup-r-dependencies@v2 | ||
with: | ||
dependencies: NA | ||
extra-packages: | | ||
knitr | ||
extraDistr | ||
lubridate | ||
wrswoR | ||
tweedie | ||
splines2 | ||
xts | ||
collapse | ||
rmarkdown | ||
ggplot2 | ||
rjags | ||
coda | ||
stan-dev/cmdstanr | ||
testthat | ||
usethis | ||
rcmdcheck | ||
devtools | ||
- name: Build Cmdstan | ||
run: | | ||
cmdstanr::check_cmdstan_toolchain(fix = TRUE) | ||
cmdstanr::install_cmdstan() | ||
shell: Rscript {0} | ||
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- name: Memory check | ||
run: | | ||
R -d "valgrind --tool=memcheck --leak-check=full" --vanilla < memcheck.R |
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