Remove strict jags dependencies

nicholasjclark · Jun 14, 2022 · 01d490a · 01d490a
1 parent 36899df
commit 01d490a
Show file tree

Hide file tree

Showing 17 changed files with 2,913 additions and 2,911 deletions.
diff --git a/.DS_Store b/.DS_Store
diff --git a/DESCRIPTION b/DESCRIPTION
@@ -15,9 +15,11 @@ Description: This package is for fitting Bayesian Generalised Additive Models to
              uses sequential importance sampling to assimilate new observations as they become available.
 Maintainer: Nicholas J Clark <[email protected]>
 License: MIT + file LICENSE
-Depends: R (>= 3.6.0), mgcv, rjags, parallel, runjags
+Depends: R (>= 3.6.0), mgcv, parallel
 Imports: 
     pbapply,
+    rjags,
+    runjags,
     tweedie,
     lubridate,
     MASS,

diff --git a/NEON_manuscript/.DS_Store b/NEON_manuscript/.DS_Store
diff --git a/NEON_manuscript/Case studies/.DS_Store b/NEON_manuscript/Case studies/.DS_Store
diff --git a/NEON_manuscript/Case studies/mvgam_case_study2_files/.DS_Store b/NEON_manuscript/Case studies/mvgam_case_study2_files/.DS_Store
diff --git a/NEON_manuscript/Case studies/mvgam_case_study3.html b/NEON_manuscript/Case studies/mvgam_case_study3.html
diff --git a/NEON_manuscript/Case studies/rodents_data.csv b/NEON_manuscript/Case studies/rodents_data.csv
diff --git a/NEON_manuscript/Case studies/rsconnect/.DS_Store b/NEON_manuscript/Case studies/rsconnect/.DS_Store
diff --git a/NEON_manuscript/Case studies/rsconnect/documents/.DS_Store b/NEON_manuscript/Case studies/rsconnect/documents/.DS_Store
diff --git a/NEON_manuscript/Case studies/rsconnect/documents/mvgam_case_study1.Rmd/.DS_Store b/NEON_manuscript/Case studies/rsconnect/documents/mvgam_case_study1.Rmd/.DS_Store
diff --git a/NEON_manuscript/Case studies/rsconnect/documents/mvgam_case_study1.Rmd/rpubs.com/.DS_Store b/NEON_manuscript/Case studies/rsconnect/documents/mvgam_case_study1.Rmd/rpubs.com/.DS_Store
diff --git a/NEON_manuscript/Case studies/rsconnect/documents/mvgam_case_study2.Rmd/.DS_Store b/NEON_manuscript/Case studies/rsconnect/documents/mvgam_case_study2.Rmd/.DS_Store
diff --git a/NEON_manuscript/Case studies/rsconnect/documents/mvgam_case_study2.Rmd/rpubs.com/.DS_Store b/NEON_manuscript/Case studies/rsconnect/documents/mvgam_case_study2.Rmd/rpubs.com/.DS_Store
diff --git a/...cript/Case studies/rsconnect/documents/mvgam_case_study3.Rmd/rpubs.com/rpubs/Document.dcf b/...cript/Case studies/rsconnect/documents/mvgam_case_study3.Rmd/rpubs.com/rpubs/Document.dcf
@@ -1,10 +1,10 @@
-name: Document
-title:
-username:
-account: rpubs
-server: rpubs.com
-hostUrl: rpubs.com
-appId: https://api.rpubs.com/api/v1/document/863866/d3c20f81456d4001bbedd7b7724e43b3
-bundleId: https://api.rpubs.com/api/v1/document/863866/d3c20f81456d4001bbedd7b7724e43b3
-url: http://rpubs.com/publish/claim/863866/318cc405d520454fbadd3984cdf072af
-when: 1644382572.22205
+name: Document
+title:
+username:
+account: rpubs
+server: rpubs.com
+hostUrl: rpubs.com
+appId: https://api.rpubs.com/api/v1/document/863866/d3c20f81456d4001bbedd7b7724e43b3
+bundleId: https://api.rpubs.com/api/v1/document/863866/d3c20f81456d4001bbedd7b7724e43b3
+url: http://rpubs.com/publish/claim/863866/318cc405d520454fbadd3984cdf072af
+when: 1644382572.22205
diff --git a/...se studies/rsconnect/documents/mvgam_case_study3.Rmd/rpubs.com/rpubs/Publish Document.dcf b/...se studies/rsconnect/documents/mvgam_case_study3.Rmd/rpubs.com/rpubs/Publish Document.dcf
@@ -1,11 +1,11 @@
-name: Publish Document
-title:
-username:
-account: rpubs
-server: rpubs.com
-hostUrl: rpubs.com
-appId: https://api.rpubs.com/api/v1/document/863866/d3c20f81456d4001bbedd7b7724e43b3
-bundleId: https://api.rpubs.com/api/v1/document/863866/d3c20f81456d4001bbedd7b7724e43b3
-url: http://rpubs.com/NickClark47/863866
-when: 1654842054.43947
-lastSyncTime: 1654842054.43947
+name: Publish Document
+title:
+username:
+account: rpubs
+server: rpubs.com
+hostUrl: rpubs.com
+appId: https://api.rpubs.com/api/v1/document/863866/d3c20f81456d4001bbedd7b7724e43b3
+bundleId: https://api.rpubs.com/api/v1/document/863866/d3c20f81456d4001bbedd7b7724e43b3
+url: http://rpubs.com/NickClark47/863866
+when: 1654842054.43947
+lastSyncTime: 1654842054.43947
diff --git a/NEON_manuscript/Figures/.DS_Store b/NEON_manuscript/Figures/.DS_Store
diff --git a/NEON_manuscript/Manuscript/.DS_Store b/NEON_manuscript/Manuscript/.DS_Store