HM Distance

.gitignore

@@ -13,7 +13,13 @@
 /bin/
 # MZ ingnore every direcotry with these names
 CMakeFiles/
+<<<<<<< HEAD
 
+=======
+# WG all locations
+**/CMakeFiles
+**/.vscode
+>>>>>>> 2d81fae76f5a9e65b2549f6a0861862a8a4dda00
 # User-specific files
 *.suo
 *.user

bin/script.py

@@ -0,0 +1,3 @@
+import os
+for i in range(1,5):
+    os.system("nohup ./HMSearchApp %s %s &"%(i,i+1))

main,.py

@@ -0,0 +1,15 @@
+import pandas as pd
+import numpy as np
+import os
+
+data = {}
+for i in os.listdir():
+    if not i.endswith(".py"):
+        df = pd.read_csv(i)
+        df = df[df[" activity inference"] != 3]
+        uid=i.split("_")[1].split(".")[0]
+        data[uid] = df[" activity inference"].value_counts()[0]/len(df)
+
+
+print(data)
+~                                                        

src/CMakeLists.txt

@@ -28,6 +28,6 @@ add_dependencies(libSearch libCommon)
 add_dependencies(EuclidSearchApp  libCommon libMetric libSearch)	
 add_dependencies(EditDistSearchApp  libCommon libMetric libSearch)	
 add_dependencies(ExtractFastaApp  libCommon libMetric libSearch)	
-
+add_dependencies(HMSearchApp      libCommon libMetric libSearch)
 
 set_property(DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} PROPERTY VS_STARTUP_PROJECT tapps)