-
Notifications
You must be signed in to change notification settings - Fork 393
Vartrix #498
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
Closed
Closed
Vartrix #498
Conversation
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Add nf-core/atacseq test dataset
Changed test dataset
Add social preview image
Add full test-dataset
Revert "dualrnaseq"
Remove social preview image to use GitHub OpenGraph
add test dataset for hicar
Revert "add test dataset for hicar"
Update master docs
Revert "Circdna"
@stela2502 Is this still needed? :) If yes please open a new PR where you checkout the modules branch and work from that one https://github.com/nf-core/test-datasets/blob/modules/README.md#adding-new-data |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
Please add the test files for the vartrix module. They are based on the 10x test files and even a howto on how to get these files is included. Hope this if OK with you. The files are quite tiny.
-rw-r--r-- 2 med-sal med-sal 7,1K apr 7 14:45 barcodes.tsv
-rw-r--r-- 2 med-sal med-sal 5,5K apr 7 11:35 ChrM.fa.gz
-rw-rw-r-- 1 med-sal med-sal 14M apr 7 16:22 ChrM_subset.bam
-rw-rw-r-- 2 med-sal med-sal 2,2K apr 7 15:20 ChrM_subset.bam.bai
-rw-rw-r-- 2 med-sal med-sal 282K apr 7 15:18 ChrM_testData_R1_001.fastq.gz
-rw-rw-r-- 2 med-sal med-sal 289K apr 7 15:18 ChrM_testData_R2_001.fastq.gz
-rw-rw-r-- 2 med-sal med-sal 1,7K apr 7 15:20 README.md
-rw-r--r-- 1 med-sal med-sal 2,2K apr 7 16:35 var.flt.vcf.gz