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Initial release

Initial release #218

Triggered via pull request June 15, 2026 14:56
Status Failure
Total duration 10m 9s
Artifacts

nf-test.yml

on: pull_request
nf-test-changes
16s
nf-test-changes
Matrix: nf-test
confirm-pass
6s
confirm-pass
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82 errors and 29 warnings
conda | latest-everything | 1/7
Test with latest-everything failed
conda | latest-everything | 1/7
Process completed with exit code 1.
conda | 25.10.4 | 1/7
Process completed with exit code 1.
conda | 25.10.4 | 1/7
Test with 25.10.4 failed
conda | 25.10.4 | 1/7
Process completed with exit code 1.
conda | 25.10.4 | 2/7
Process completed with exit code 1.
conda | 25.10.4 | 2/7
Test with 25.10.4 failed
conda | 25.10.4 | 2/7
Process completed with exit code 1.
conda | latest-everything | 3/7
Test with latest-everything failed
conda | latest-everything | 3/7
Process completed with exit code 1.
conda | latest-everything | 2/7
Test with latest-everything failed
conda | latest-everything | 2/7
Process completed with exit code 1.
conda | 25.10.4 | 3/7
Process completed with exit code 1.
conda | 25.10.4 | 3/7
Test with 25.10.4 failed
conda | 25.10.4 | 3/7
Process completed with exit code 1.
docker | latest-everything | 2/7
Test with latest-everything failed
docker | latest-everything | 2/7
Process completed with exit code 1.
conda | latest-everything | 7/7
Test with latest-everything failed
conda | latest-everything | 7/7
Process completed with exit code 1.
docker | 25.10.4 | 2/7
Process completed with exit code 1.
docker | 25.10.4 | 2/7
Test with 25.10.4 failed
docker | 25.10.4 | 2/7
Process completed with exit code 1.
docker | latest-everything | 6/7
Test with latest-everything failed
docker | latest-everything | 6/7
Process completed with exit code 1.
conda | 25.10.4 | 7/7
Process completed with exit code 1.
conda | 25.10.4 | 7/7
Test with 25.10.4 failed
conda | 25.10.4 | 7/7
Process completed with exit code 1.
docker | 25.10.4 | 1/7
Process completed with exit code 1.
docker | 25.10.4 | 1/7
Test with 25.10.4 failed
docker | 25.10.4 | 1/7
Process completed with exit code 1.
docker | 25.10.4 | 4/7
Process completed with exit code 1.
docker | 25.10.4 | 4/7
Test with 25.10.4 failed
docker | 25.10.4 | 4/7
Process completed with exit code 1.
singularity | 25.10.4 | 1/7
Process completed with exit code 1.
singularity | 25.10.4 | 1/7
Test with 25.10.4 failed
singularity | 25.10.4 | 1/7
Process completed with exit code 1.
docker | latest-everything | 7/7
Test with latest-everything failed
docker | latest-everything | 7/7
Process completed with exit code 1.
singularity | latest-everything | 5/7
Test with latest-everything failed
singularity | latest-everything | 5/7
Process completed with exit code 1.
singularity | latest-everything | 3/7
Test with latest-everything failed
singularity | latest-everything | 3/7
Process completed with exit code 1.
docker | 25.10.4 | 7/7
Process completed with exit code 1.
docker | 25.10.4 | 7/7
Test with 25.10.4 failed
docker | 25.10.4 | 7/7
Process completed with exit code 1.
singularity | 25.10.4 | 2/7
Process completed with exit code 1.
singularity | 25.10.4 | 2/7
Test with 25.10.4 failed
singularity | 25.10.4 | 2/7
Process completed with exit code 1.
singularity | 25.10.4 | 6/7
Process completed with exit code 1.
singularity | 25.10.4 | 6/7
Test with 25.10.4 failed
singularity | 25.10.4 | 6/7
Process completed with exit code 1.
singularity | latest-everything | 4/7
Test with latest-everything failed
singularity | latest-everything | 4/7
Process completed with exit code 1.
singularity | 25.10.4 | 5/7
Process completed with exit code 1.
singularity | 25.10.4 | 5/7
Test with 25.10.4 failed
singularity | 25.10.4 | 5/7
Process completed with exit code 1.
singularity | 25.10.4 | 4/7
Process completed with exit code 1.
singularity | 25.10.4 | 4/7
Test with 25.10.4 failed
singularity | 25.10.4 | 4/7
Process completed with exit code 1.
singularity | 25.10.4 | 7/7
Process completed with exit code 1.
singularity | 25.10.4 | 7/7
Test with 25.10.4 failed
singularity | 25.10.4 | 7/7
Process completed with exit code 1.
singularity | latest-everything | 7/7
Test with latest-everything failed
singularity | latest-everything | 7/7
Process completed with exit code 1.
conda | 25.10.4 | 5/7
Process completed with exit code 1.
conda | 25.10.4 | 5/7
Test with 25.10.4 failed
conda | 25.10.4 | 5/7
Process completed with exit code 1.
conda | latest-everything | 5/7
Test with latest-everything failed
conda | latest-everything | 5/7
Process completed with exit code 1.
singularity | latest-everything | 6/7
Test with latest-everything failed
singularity | latest-everything | 6/7
Process completed with exit code 1.
conda | latest-everything | 4/7
Test with latest-everything failed
conda | latest-everything | 4/7
Process completed with exit code 1.
conda | 25.10.4 | 4/7
Process completed with exit code 1.
conda | 25.10.4 | 4/7
Test with 25.10.4 failed
conda | 25.10.4 | 4/7
Process completed with exit code 1.
conda | latest-everything | 6/7
Test with latest-everything failed
conda | latest-everything | 6/7
Process completed with exit code 1.
conda | 25.10.4 | 6/7
Process completed with exit code 1.
conda | 25.10.4 | 6/7
Test with 25.10.4 failed
conda | 25.10.4 | 6/7
Process completed with exit code 1.
confirm-pass
Process completed with exit code 1.
conda | latest-everything | 1/7
Test with latest-everything failed but will not cause workflow failure. Please check if the error is expected or if it needs fixing.
conda | latest-everything | 3/7
Test with latest-everything failed but will not cause workflow failure. Please check if the error is expected or if it needs fixing.
conda | latest-everything | 2/7
Test with latest-everything failed but will not cause workflow failure. Please check if the error is expected or if it needs fixing.
docker | latest-everything | 2/7
Test with latest-everything failed but will not cause workflow failure. Please check if the error is expected or if it needs fixing.
conda | latest-everything | 7/7
Test with latest-everything failed but will not cause workflow failure. Please check if the error is expected or if it needs fixing.
docker | latest-everything | 6/7
Test with latest-everything failed but will not cause workflow failure. Please check if the error is expected or if it needs fixing.
singularity | 25.10.4 | 3/7
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: eWaterCycle/setup-apptainer@3f706d898c9db585b1d741b4692e66755f3a1b40. Actions will be forced to run with Node.js 24 by default starting June 16th, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
singularity | 25.10.4 | 1/7
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: eWaterCycle/setup-apptainer@3f706d898c9db585b1d741b4692e66755f3a1b40. Actions will be forced to run with Node.js 24 by default starting June 16th, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
docker | latest-everything | 7/7
Test with latest-everything failed but will not cause workflow failure. Please check if the error is expected or if it needs fixing.
singularity | latest-everything | 5/7
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: eWaterCycle/setup-apptainer@3f706d898c9db585b1d741b4692e66755f3a1b40. Actions will be forced to run with Node.js 24 by default starting June 16th, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
singularity | latest-everything | 5/7
Test with latest-everything failed but will not cause workflow failure. Please check if the error is expected or if it needs fixing.
singularity | latest-everything | 3/7
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: eWaterCycle/setup-apptainer@3f706d898c9db585b1d741b4692e66755f3a1b40. Actions will be forced to run with Node.js 24 by default starting June 16th, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
singularity | latest-everything | 3/7
Test with latest-everything failed but will not cause workflow failure. Please check if the error is expected or if it needs fixing.
singularity | latest-everything | 1/7
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: eWaterCycle/setup-apptainer@3f706d898c9db585b1d741b4692e66755f3a1b40. Actions will be forced to run with Node.js 24 by default starting June 16th, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
singularity | 25.10.4 | 2/7
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: eWaterCycle/setup-apptainer@3f706d898c9db585b1d741b4692e66755f3a1b40. Actions will be forced to run with Node.js 24 by default starting June 16th, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
singularity | 25.10.4 | 6/7
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: eWaterCycle/setup-apptainer@3f706d898c9db585b1d741b4692e66755f3a1b40. Actions will be forced to run with Node.js 24 by default starting June 16th, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
singularity | latest-everything | 2/7
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: eWaterCycle/setup-apptainer@3f706d898c9db585b1d741b4692e66755f3a1b40. Actions will be forced to run with Node.js 24 by default starting June 16th, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
singularity | latest-everything | 4/7
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: eWaterCycle/setup-apptainer@3f706d898c9db585b1d741b4692e66755f3a1b40. Actions will be forced to run with Node.js 24 by default starting June 16th, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
singularity | latest-everything | 4/7
Test with latest-everything failed but will not cause workflow failure. Please check if the error is expected or if it needs fixing.
singularity | 25.10.4 | 5/7
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: eWaterCycle/setup-apptainer@3f706d898c9db585b1d741b4692e66755f3a1b40. Actions will be forced to run with Node.js 24 by default starting June 16th, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
singularity | 25.10.4 | 4/7
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: eWaterCycle/setup-apptainer@3f706d898c9db585b1d741b4692e66755f3a1b40. Actions will be forced to run with Node.js 24 by default starting June 16th, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
singularity | 25.10.4 | 7/7
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: eWaterCycle/setup-apptainer@3f706d898c9db585b1d741b4692e66755f3a1b40. Actions will be forced to run with Node.js 24 by default starting June 16th, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
singularity | latest-everything | 7/7
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: eWaterCycle/setup-apptainer@3f706d898c9db585b1d741b4692e66755f3a1b40. Actions will be forced to run with Node.js 24 by default starting June 16th, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
singularity | latest-everything | 7/7
Test with latest-everything failed but will not cause workflow failure. Please check if the error is expected or if it needs fixing.
conda | latest-everything | 5/7
Test with latest-everything failed but will not cause workflow failure. Please check if the error is expected or if it needs fixing.
singularity | latest-everything | 6/7
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: eWaterCycle/setup-apptainer@3f706d898c9db585b1d741b4692e66755f3a1b40. Actions will be forced to run with Node.js 24 by default starting June 16th, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
singularity | latest-everything | 6/7
Test with latest-everything failed but will not cause workflow failure. Please check if the error is expected or if it needs fixing.
conda | latest-everything | 4/7
Test with latest-everything failed but will not cause workflow failure. Please check if the error is expected or if it needs fixing.
conda | latest-everything | 6/7
Test with latest-everything failed but will not cause workflow failure. Please check if the error is expected or if it needs fixing.