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nf-core / pairgenomealign Public

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Fix regressions remaining in 3.0.1 - #142

#142

Merged

charles-plessy merged 6 commits into

devnf-core/pairgenomealign:devfrom

fix_regressions_remaining_in_3.0.1nf-core/pairgenomealign:fix_regressions_remaining_in_3.0.1Copy head branch name to clipboard

Jul 16, 2026

Conversation Commits6 (6)Checks Files changed

Merged

Fix regressions remaining in 3.0.1#142
charles-plessy merged 6 commits into
devfrom
fix_regressions_remaining_in_3.0.1

Commits

Commits on Jul 10, 2026

Restore maximum tandem repeat unit length to 400
charles-plessy
committed

Commits on Jul 16, 2026

Update LAST to 1652 and Sam/Bcftools to 1.24.
charles-plessy
committed
Merge branch 'dev' into fix_regressions_remaining_in_3.0.1
charles-plessy
committed
Match pipeline version number.
charles-plessy
committed
Restore missing `fasta` in the _target_ genome name indexed for CRAM files.
charles-plessy
committed
Avoid collisions by adding `.cuts` to the name…
charles-plessy
committed

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