Fix ext.args in mmseqs/createtsv (#7307)

* Fix ext.args variables * Update snapshot
nf-core · Jan 15, 2025 · 411a94f · 411a94f
1 parent 0170ccd
commit 411a94f
Showing 2 changed files with 7 additions and 7 deletions.
diff --git a/modules/nf-core/mmseqs/createtsv/main.nf b/modules/nf-core/mmseqs/createtsv/main.nf
@@ -22,9 +22,9 @@ process MMSEQS_CREATETSV {
 
     script:
     def args = task.ext.args ?: ''
-    def args2 = task.ext.args ?: "*.dbtype" // database generated by mmyseqs cluster | search | taxonomy | ...
-    def args3 = task.ext.args ?: "*.dbtype" // database generated by mmyseqs/createdb
-    def args4 = task.ext.args ?: "*.dbtype" // database generated by mmyseqs/createdb
+    def args2 = task.ext.args2 ?: "*.dbtype" // database generated by mmyseqs cluster | search | taxonomy | ...
+    def args3 = task.ext.args3 ?: "*.dbtype" // database generated by mmyseqs/createdb
+    def args4 = task.ext.args4 ?: "*.dbtype" // database generated by mmyseqs/createdb
     def prefix = task.ext.prefix ?: "${meta.id}"
 
     """

diff --git a/modules/nf-core/mmseqs/createtsv/tests/main.nf.test.snap b/modules/nf-core/mmseqs/createtsv/tests/main.nf.test.snap
@@ -113,7 +113,7 @@
                             "id": "test_result",
                             "single_end": true
                         },
-                        "test_result.tsv:md5,4e7ba50ce2879660dc6595286bf0d097"
+                        "test_result.tsv:md5,c81449fb936b76aad6f925b965e84bc5"
                     ]
                 ],
                 "1": [
@@ -125,7 +125,7 @@
                             "id": "test_result",
                             "single_end": true
                         },
-                        "test_result.tsv:md5,4e7ba50ce2879660dc6595286bf0d097"
+                        "test_result.tsv:md5,c81449fb936b76aad6f925b965e84bc5"
                     ]
                 ],
                 "versions": [
@@ -135,8 +135,8 @@
         ],
         "meta": {
             "nf-test": "0.9.2",
-            "nextflow": "24.10.2"
+            "nextflow": "24.10.3"
         },
-        "timestamp": "2024-12-05T10:50:42.432284995"
+        "timestamp": "2025-01-15T11:17:04.119521629"
     }
 }