1.0.0 - German Rollmops - 2023-02-15
v1.0.0 - German Rollmops - [2023-02-15]
Initial release of nf-core/funcscan, created with the nf-core template.
Added
- Added annotation tools (Prokka, Prodigal, Bakta).
- Added AMP screening workflow (tools: Macrel, AMPlify, ampir, hmmsearch).
- Added ARG screening workflow (tools: ABRicate, AMRFinderPlus, DeepARG, fARGene).
- Added BGC screening workflow (tools: antiSMASH, DeepBGC, GECCO, hmmsearch).
- Added workflow summary tools (tools: hAMRonization, AMPcombi, comBGC).
Fixed
Dependencies
Deprecated
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