Skip to content
nf-core CI

Fix annotsv TCL error #223

Sign in to view logs

Fix annotsv TCL error

Fix annotsv TCL error #223

Triggered via pull request January 16, 2024 12:02
@nvnieuwknvnieuwk
synchronize #69
fix-annotsv
Status Failure
Total duration 2m 59s
Artifacts 1

ci.yml

on: pull_request
Matrix: test_all
Fit to window
Zoom out
Zoom in

Annotations

39 errors
Run nf-test with vcf_concat_bcftools-23.10.0
Process completed with exit code 1.
Run nf-test with vcf_annotate_vep_annotsv_vcfanno-latest-everything
The job was canceled because "_23_10_0_vcf_concat_bcfto" failed.
Run nf-test with vcf_annotate_vep_annotsv_vcfanno-latest-everything
Process completed with exit code 1.
Run nf-test with vcf_annotate_vep_annotsv_vcfanno-latest-everything
The operation was canceled.
Run nf-test with bam_variant_calling_gridss-latest-everything
The job was canceled because "_23_10_0_vcf_concat_bcfto" failed.
Run nf-test with bam_variant_calling_gridss-latest-everything
The operation was canceled.
Run nf-test with bam_variant_calling_gridss-latest-everything
Process completed with exit code 1.
Run nf-test with vcf_annotate_vep_annotsv_vcfanno-23.10.0
The job was canceled because "_23_10_0_vcf_concat_bcfto" failed.
Run nf-test with vcf_annotate_vep_annotsv_vcfanno-23.10.0
The operation was canceled.
Run nf-test with vcf_annotate_vep_annotsv_vcfanno-23.10.0
Process completed with exit code 1.
Run nf-test with vcf_concat_bcftools-latest-everything
The job was canceled because "_23_10_0_vcf_concat_bcfto" failed.
Run nf-test with vcf_concat_bcftools-latest-everything
The operation was canceled.
Run nf-test with vcf_concat_bcftools-latest-everything
Process completed with exit code 1.
Run nf-test with bam_cnv_calling-latest-everything
The job was canceled because "_23_10_0_vcf_concat_bcfto" failed.
Run nf-test with bam_cnv_calling-latest-everything
The operation was canceled.
Run nf-test with pipeline_duplicates-23.10.0
The job was canceled because "_23_10_0_vcf_concat_bcfto" failed.
Run nf-test with pipeline_duplicates-23.10.0
The operation was canceled.
Run nf-test with bam_variant_calling_gridss-23.10.0
The job was canceled because "_23_10_0_vcf_concat_bcfto" failed.
Run nf-test with bam_variant_calling_gridss-23.10.0
The operation was canceled.
Run nf-test with bam_cnv_calling-23.10.0
The job was canceled because "_23_10_0_vcf_concat_bcfto" failed.
Run nf-test with bam_cnv_calling-23.10.0
The operation was canceled.
Run nf-test with pipeline_families-23.10.0
The job was canceled because "_23_10_0_vcf_concat_bcfto" failed.
Run nf-test with pipeline_families-23.10.0
The operation was canceled.
Run nf-test with pipeline_sv-23.10.0
The job was canceled because "_23_10_0_vcf_concat_bcfto" failed.
Run nf-test with pipeline_sv-23.10.0
The operation was canceled.
Run nf-test with pipeline_cnv-23.10.0
The job was canceled because "_23_10_0_vcf_concat_bcfto" failed.
Run nf-test with pipeline_cnv-23.10.0
The operation was canceled.
Run nf-test with pipeline_sv-latest-everything
The job was canceled because "_23_10_0_vcf_concat_bcfto" failed.
Run nf-test with pipeline_sv-latest-everything
The operation was canceled.
Run nf-test with bam_sv_calling-23.10.0
The job was canceled because "_23_10_0_vcf_concat_bcfto" failed.
Run nf-test with bam_sv_calling-23.10.0
The operation was canceled.
Run nf-test with pipeline_cnv-latest-everything
The job was canceled because "_23_10_0_vcf_concat_bcfto" failed.
Run nf-test with pipeline_cnv-latest-everything
The operation was canceled.
Run nf-test with bam_sv_calling-latest-everything
The job was canceled because "_23_10_0_vcf_concat_bcfto" failed.
Run nf-test with bam_sv_calling-latest-everything
The operation was canceled.
Run nf-test with pipeline_duplicates-latest-everything
The job was canceled because "_23_10_0_vcf_concat_bcfto" failed.
Run nf-test with pipeline_duplicates-latest-everything
The operation was canceled.
Run nf-test with pipeline_families-latest-everything
The job was canceled because "_23_10_0_vcf_concat_bcfto" failed.
Run nf-test with pipeline_families-latest-everything
The operation was canceled.

Artifacts

Produced during runtime
Name Size
nf-test-workdir Expired
108 MB