Skip to content
nf-core CI

Add proper testing + fix some issues found #207

Sign in to view logs

Add proper testing + fix some issues found

Add proper testing + fix some issues found #207

Triggered via pull request January 11, 2024 10:15
@nvnieuwknvnieuwk
synchronize #64
proper-testing
Status Failure
Total duration 1m 56s
Artifacts –

ci.yml

on: pull_request
Matrix: test_all
Fit to window
Zoom out
Zoom in

Annotations

56 errors
Run nf-test with bam_variant_calling_wisecondorx-23.10.0
Process completed with exit code 1.
Run nf-test with bam_repeat_estimation_expansionhunter-23.10.0
The job was canceled because "_23_10_0_bam_variant_ca_6" failed.
Run nf-test with bam_prepare_samtools-23.10.0
The job was canceled because "_23_10_0_bam_variant_ca_6" failed.
Run nf-test with bam_variant_calling_wisecondorx-latest-everything
The job was canceled because "_23_10_0_bam_variant_ca_6" failed.
Run nf-test with bam_variant_calling_wisecondorx-latest-everything
Process completed with exit code 1.
Run nf-test with vcf_merge_callers_jasmine-latest-everything
The job was canceled because "_23_10_0_bam_variant_ca_6" failed.
Run nf-test with bam_variant_calling_qdnaseq-latest-everything
The job was canceled because "_23_10_0_bam_variant_ca_6" failed.
Run nf-test with bam_variant_calling_qdnaseq-latest-everything
The operation was canceled.
Run nf-test with bam_variant_calling_smoove-latest-everything
The job was canceled because "_23_10_0_bam_variant_ca_6" failed.
Run nf-test with bam_variant_calling_smoove-latest-everything
The operation was canceled.
Run nf-test with bam_sv_calling-latest-everything
The job was canceled because "_23_10_0_bam_variant_ca_6" failed.
Run nf-test with bam_sv_calling-latest-everything
The operation was canceled.
Run nf-test with pipeline_families-latest-everything
The job was canceled because "_23_10_0_bam_variant_ca_6" failed.
Run nf-test with pipeline_families-latest-everything
The operation was canceled.
Run nf-test with vcf_merge_family_jasmine-latest-everything
The job was canceled because "_23_10_0_bam_variant_ca_6" failed.
Run nf-test with vcf_merge_family_jasmine-latest-everything
The operation was canceled.
Run nf-test with pipeline_families-23.10.0
The job was canceled because "_23_10_0_bam_variant_ca_6" failed.
Run nf-test with pipeline_families-23.10.0
The operation was canceled.
Run nf-test with pipeline_sv-latest-everything
The job was canceled because "_23_10_0_bam_variant_ca_6" failed.
Run nf-test with pipeline_sv-latest-everything
The operation was canceled.
Run nf-test with bam_variant_calling_qdnaseq-23.10.0
The job was canceled because "_23_10_0_bam_variant_ca_6" failed.
Run nf-test with bam_variant_calling_qdnaseq-23.10.0
The operation was canceled.
Run nf-test with bam_cnv_calling-23.10.0
The job was canceled because "_23_10_0_bam_variant_ca_6" failed.
Run nf-test with bam_cnv_calling-23.10.0
The operation was canceled.
Run nf-test with vcf_annotate_vep_annotsv_vcfanno-latest-everything
The job was canceled because "_23_10_0_bam_variant_ca_6" failed.
Run nf-test with vcf_annotate_vep_annotsv_vcfanno-latest-everything
The operation was canceled.
Run nf-test with bam_variant_calling_gridss-latest-everything
The job was canceled because "_23_10_0_bam_variant_ca_6" failed.
Run nf-test with bam_variant_calling_gridss-latest-everything
The operation was canceled.
Run nf-test with pipeline_repeats-23.10.0
The job was canceled because "_23_10_0_bam_variant_ca_6" failed.
Run nf-test with pipeline_repeats-23.10.0
The operation was canceled.
Run nf-test with pipeline_cnv-latest-everything
The job was canceled because "_23_10_0_bam_variant_ca_6" failed.
Run nf-test with pipeline_cnv-latest-everything
The operation was canceled.
Run nf-test with bam_cnv_calling-latest-everything
The job was canceled because "_23_10_0_bam_variant_ca_6" failed.
Run nf-test with bam_cnv_calling-latest-everything
The operation was canceled.
Run nf-test with bam_variant_calling_manta-latest-everything
The job was canceled because "_23_10_0_bam_variant_ca_6" failed.
Run nf-test with bam_variant_calling_manta-latest-everything
The operation was canceled.
Run nf-test with vcf_merge_family_jasmine-23.10.0
The job was canceled because "_23_10_0_bam_variant_ca_6" failed.
Run nf-test with vcf_merge_family_jasmine-23.10.0
The operation was canceled.
Run nf-test with pipeline_sv-23.10.0
The job was canceled because "_23_10_0_bam_variant_ca_6" failed.
Run nf-test with pipeline_sv-23.10.0
The operation was canceled.
Run nf-test with pipeline_duplicates-23.10.0
The job was canceled because "_23_10_0_bam_variant_ca_6" failed.
Run nf-test with pipeline_duplicates-23.10.0
The operation was canceled.
Run nf-test with pipeline_repeats-latest-everything
The job was canceled because "_23_10_0_bam_variant_ca_6" failed.
Run nf-test with pipeline_repeats-latest-everything
The operation was canceled.
Run nf-test with vcf_annotate_vep_annotsv_vcfanno-23.10.0
The job was canceled because "_23_10_0_bam_variant_ca_6" failed.
Run nf-test with vcf_annotate_vep_annotsv_vcfanno-23.10.0
The operation was canceled.
Run nf-test with pipeline_duplicates-latest-everything
The job was canceled because "_23_10_0_bam_variant_ca_6" failed.
Run nf-test with pipeline_duplicates-latest-everything
The operation was canceled.
Run nf-test with pipeline_cnv-23.10.0
The job was canceled because "_23_10_0_bam_variant_ca_6" failed.
Run nf-test with pipeline_cnv-23.10.0
The operation was canceled.
Run nf-test with bam_variant_calling_gridss-23.10.0
The job was canceled because "_23_10_0_bam_variant_ca_6" failed.
Run nf-test with bam_variant_calling_gridss-23.10.0
The operation was canceled.
Run nf-test with bam_sv_calling-23.10.0
The job was canceled because "_23_10_0_bam_variant_ca_6" failed.
Run nf-test with bam_sv_calling-23.10.0
The operation was canceled.
Run nf-test with bam_variant_calling_manta-23.10.0
The job was canceled because "_23_10_0_bam_variant_ca_6" failed.
Run nf-test with bam_variant_calling_manta-23.10.0
The operation was canceled.