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nf-core template 3.2.0 #346

nf-core template 3.2.0

nf-core template 3.2.0 #346

Triggered via pull request January 31, 2025 12:46
Status Failure
Total duration 27s
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ci.yml

on: pull_request
Matrix: test_all
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43 errors
Run nf-test with bam_repeat_estimation_expansionhunter-24.04.0
This request has been automatically failed because it uses a deprecated version of `actions/upload-artifact: v3`. Learn more: https://github.blog/changelog/2024-04-16-deprecation-notice-v3-of-the-artifact-actions/
Run nf-test with bam_sv_calling-24.04.0
This request has been automatically failed because it uses a deprecated version of `actions/upload-artifact: v3`. Learn more: https://github.blog/changelog/2024-04-16-deprecation-notice-v3-of-the-artifact-actions/
Run nf-test with bam_prepare_samtools-24.04.0
This request has been automatically failed because it uses a deprecated version of `actions/upload-artifact: v3`. Learn more: https://github.blog/changelog/2024-04-16-deprecation-notice-v3-of-the-artifact-actions/
Run nf-test with bam_cnv_calling-24.04.0
This request has been automatically failed because it uses a deprecated version of `actions/upload-artifact: v3`. Learn more: https://github.blog/changelog/2024-04-16-deprecation-notice-v3-of-the-artifact-actions/
Run nf-test with bam_variant_calling_delly-24.04.0
This request has been automatically failed because it uses a deprecated version of `actions/upload-artifact: v3`. Learn more: https://github.blog/changelog/2024-04-16-deprecation-notice-v3-of-the-artifact-actions/
Run nf-test with pipeline_cnv-24.04.0
This request has been automatically failed because it uses a deprecated version of `actions/upload-artifact: v3`. Learn more: https://github.blog/changelog/2024-04-16-deprecation-notice-v3-of-the-artifact-actions/
Run nf-test with vcf_concat_bcftools-24.04.0
This request has been automatically failed because it uses a deprecated version of `actions/upload-artifact: v3`. Learn more: https://github.blog/changelog/2024-04-16-deprecation-notice-v3-of-the-artifact-actions/
Run nf-test with vcf_annotate_vep_annotsv_vcfanno-24.04.0
This request has been automatically failed because it uses a deprecated version of `actions/upload-artifact: v3`. Learn more: https://github.blog/changelog/2024-04-16-deprecation-notice-v3-of-the-artifact-actions/
Run nf-test with bam_variant_calling_qdnaseq-24.04.0
This request has been automatically failed because it uses a deprecated version of `actions/upload-artifact: v3`. Learn more: https://github.blog/changelog/2024-04-16-deprecation-notice-v3-of-the-artifact-actions/
Run nf-test with pipeline_families-24.04.0
This request has been automatically failed because it uses a deprecated version of `actions/upload-artifact: v3`. Learn more: https://github.blog/changelog/2024-04-16-deprecation-notice-v3-of-the-artifact-actions/
Run nf-test with pipeline_duplicates-24.04.0
This request has been automatically failed because it uses a deprecated version of `actions/upload-artifact: v3`. Learn more: https://github.blog/changelog/2024-04-16-deprecation-notice-v3-of-the-artifact-actions/
Run nf-test with pipeline_repeats-24.04.0
The job was canceled because "_24_04_0_bam_sv_calling" failed.
Run nf-test with pipeline_repeats-24.04.0
This request has been automatically failed because it uses a deprecated version of `actions/upload-artifact: v3`. Learn more: https://github.blog/changelog/2024-04-16-deprecation-notice-v3-of-the-artifact-actions/
Run nf-test with vcf_merge_callers_jasmine-24.04.0
The job was canceled because "_24_04_0_bam_sv_calling" failed.
Run nf-test with vcf_merge_callers_jasmine-24.04.0
This request has been automatically failed because it uses a deprecated version of `actions/upload-artifact: v3`. Learn more: https://github.blog/changelog/2024-04-16-deprecation-notice-v3-of-the-artifact-actions/
Run nf-test with bam_variant_calling_manta-24.04.0
The job was canceled because "_24_04_0_bam_sv_calling" failed.
Run nf-test with bam_variant_calling_manta-24.04.0
This request has been automatically failed because it uses a deprecated version of `actions/upload-artifact: v3`. Learn more: https://github.blog/changelog/2024-04-16-deprecation-notice-v3-of-the-artifact-actions/
Run nf-test with pipeline_sv-24.04.0
The job was canceled because "_24_04_0_bam_sv_calling" failed.
Run nf-test with pipeline_sv-24.04.0
This request has been automatically failed because it uses a deprecated version of `actions/upload-artifact: v3`. Learn more: https://github.blog/changelog/2024-04-16-deprecation-notice-v3-of-the-artifact-actions/
Run nf-test with bam_variant_calling_wisecondorx-24.04.0
The job was canceled because "_24_04_0_bam_sv_calling" failed.
Run nf-test with bam_variant_calling_wisecondorx-24.04.0
This request has been automatically failed because it uses a deprecated version of `actions/upload-artifact: v3`. Learn more: https://github.blog/changelog/2024-04-16-deprecation-notice-v3-of-the-artifact-actions/
Run nf-test with bam_variant_calling_smoove-24.04.0
The job was canceled because "_24_04_0_bam_sv_calling" failed.
Run nf-test with bam_variant_calling_smoove-24.04.0
This request has been automatically failed because it uses a deprecated version of `actions/upload-artifact: v3`. Learn more: https://github.blog/changelog/2024-04-16-deprecation-notice-v3-of-the-artifact-actions/
Run nf-test with vcf_merge_family_jasmine-24.04.0
The job was canceled because "_24_04_0_bam_sv_calling" failed.
Run nf-test with vcf_merge_family_jasmine-24.04.0
This request has been automatically failed because it uses a deprecated version of `actions/upload-artifact: v3`. Learn more: https://github.blog/changelog/2024-04-16-deprecation-notice-v3-of-the-artifact-actions/
Run nf-test with bam_prepare_samtools-latest-everything
The job was canceled because "_24_04_0_bam_sv_calling" failed.
Run nf-test with bam_variant_calling_manta-latest-everything
The job was canceled because "_24_04_0_bam_sv_calling" failed.
Run nf-test with bam_sv_calling-latest-everything
The job was canceled because "_24_04_0_bam_sv_calling" failed.
Run nf-test with bam_variant_calling_qdnaseq-latest-everything
The job was canceled because "_24_04_0_bam_sv_calling" failed.
Run nf-test with bam_variant_calling_smoove-latest-everything
The job was canceled because "_24_04_0_bam_sv_calling" failed.
Run nf-test with pipeline_cnv-latest-everything
The job was canceled because "_24_04_0_bam_sv_calling" failed.
Run nf-test with bam_variant_calling_delly-latest-everything
The job was canceled because "_24_04_0_bam_sv_calling" failed.
Run nf-test with bam_variant_calling_wisecondorx-latest-everything
The job was canceled because "_24_04_0_bam_sv_calling" failed.
Run nf-test with pipeline_repeats-latest-everything
The job was canceled because "_24_04_0_bam_sv_calling" failed.
Run nf-test with pipeline_duplicates-latest-everything
The job was canceled because "_24_04_0_bam_sv_calling" failed.
Run nf-test with vcf_annotate_vep_annotsv_vcfanno-latest-everything
The job was canceled because "_24_04_0_bam_sv_calling" failed.
Run nf-test with pipeline_sv-latest-everything
The job was canceled because "_24_04_0_bam_sv_calling" failed.
Run nf-test with pipeline_families-latest-everything
The job was canceled because "_24_04_0_bam_sv_calling" failed.
Run nf-test with vcf_merge_family_jasmine-latest-everything
The job was canceled because "_24_04_0_bam_sv_calling" failed.
Run nf-test with vcf_concat_bcftools-latest-everything
The job was canceled because "_24_04_0_bam_sv_calling" failed.
Run nf-test with vcf_merge_callers_jasmine-latest-everything
The job was canceled because "_24_04_0_bam_sv_calling" failed.
Run nf-test with bam_cnv_calling-latest-everything
The job was canceled because "_24_04_0_bam_sv_calling" failed.
Run nf-test with bam_repeat_estimation_expansionhunter-latest-everything
The job was canceled because "_24_04_0_bam_sv_calling" failed.