Skip to content

Conversation

kushalkolar
Copy link
Collaborator

This is necessary because caiman has no way to set a filename prefix for saving mcorr memmaps.

Once this is merged upstream in caiman: flatironinstitute/CaImAn#978 this PR in mesmerize-core can be merged. The file is first stored by caiman according to CAIMAN_TEMP and then moved back to the same dir as the input data using the UUID for the filename prefix. Very roundabout but caiman has no way to set filenames for mcorr memmaps ¯\_(ツ)_/¯

@kushalkolar kushalkolar merged commit 6b17fb5 into master May 25, 2022
@kushalkolar kushalkolar added this to the v0.1 milestone Jul 3, 2022
@kushalkolar kushalkolar deleted the caiman-tempdir-mcorr branch November 8, 2022 03:19
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

1 participant