- 📚 Interested in Deep Learning 🧠 and Computational Genomics 🧬
- 🔭 Currently working on applying Graph Neural Networks to de novo Genome Assembly
- 👨💻 My go-to languages and frameworks: Python, PyTorch, DGL
- 📫 How to reach me: Send an email to vrcek dot lovro at gmail dot com (or by clicking any of the buttons above)
- ⚡ Hobbies: Rock Climbing 🧗♂️, Swimming 🏊♂️, Reading 📖
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lbcb-sci/GNNome
lbcb-sci/GNNome PublicA framework for training graph neural networks to untangle assembly graphs obtained from OLC-based de novo genome assemblers.
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GNNome-assembly
GNNome-assembly PublicLearning to untangle genome assembly with graph neural networks.
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NeuralLayout
NeuralLayout PublicA GNN model that executes simplification algorithms used in the layout phase of de novo genome assembly process.
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121 contributions in the last year
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Activity overview
Contributed to
lbcb-sci/GNNome,
lvrcek/GNNome-assembly,
ai4na-workshop/ai4na-workshop.github.io
and 1 other
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February 2025
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