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  • Genome Institute of Singapore, A*STAR
  • Singapore
  • X @LovroVrcek

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lvrcek/README.md

Hi there, I'm Lovro 👋

Lovro's Github Lovro's Twitter Lovro's LinkedIn Lovro's email

  • 📚 Interested in Deep Learning 🧠 and Computational Genomics 🧬
  • 🔭 Currently working on applying Graph Neural Networks to de novo Genome Assembly
  • 👨‍💻 My go-to languages and frameworks: Python, PyTorch, DGL
  • 📫 How to reach me: Send an email to vrcek dot lovro at gmail dot com (or by clicking any of the buttons above)
  • ⚡ Hobbies: Rock Climbing 🧗‍♂️, Swimming 🏊‍♂️, Reading 📖

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  1. lbcb-sci/GNNome Public

    A framework for training graph neural networks to untangle assembly graphs obtained from OLC-based de novo genome assemblers.

    Python 33 4

  2. GNNome-assembly Public

    Learning to untangle genome assembly with graph neural networks.

    Python 72 11

  3. NeuralLayout Public

    A GNN model that executes simplification algorithms used in the layout phase of de novo genome assembly process.

    Python 11 3

  4. reactome/reactome_gnn Public

    Python 3 2

  5. advent-of-code-2020 Public

    My Advent of Code 2020 solutions in Python

    Python 2

  6. bioinf Public

    Forked from domjanbaric/bioinf

    Bioinformatics project - Cuckoo filter

    C++

121 contributions in the last year

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Loading A graph representing lvrcek's contributions from February 11, 2024 to February 16, 2025. The contributions are 88% commits, 11% pull requests, 1% code review, 0% issues.

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February 2025

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