try again

geonames/import.sh

@@ -1,6 +1,9 @@
 #!/usr/bin/env bash
 
-curl -I https://download.geonames.org/export/dump/allCountries.zip > results/allCountries.zip
+wget https://download.geonames.org/export/dump/allCountries.zip -O results/allCountries.zip
 unzip -o results/allCountries.zip -d results
+rm results/allCountries.zip
 tsv-filter --str-eq 7:A results/allCountries.txt > results/adm.tsv
-tsv-select -f 1-3,5-6,8-13 results/adm.tsv > uploads/input.tsv
+rm results/allCountries.txt
+tsv-select -f 1-3,5-6,8-13 results/adm.tsv > uploads/input.tsv
+rm results/adm.tsv

kubernetes/loculus/templates/geonames-deployment.yaml

@@ -26,6 +26,13 @@ spec:
         - name: geonames-import
           image: "ghcr.io/loculus-project/geonames:{{ $dockerTag }}"
           command: ["sh", "./import.sh"]
+          resources:
+            limits:
+              cpu: 20m
+              memory: 2Gi
+            requests:
+              cpu: 20m
+              memory: 200Mi
       containers:
         - name: geonames-api
           imagePullPolicy: IfNotPresent