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Add example scripts for README quick start #15

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Merged
toniecrumley merged 1 commit into from
Apr 30, 2026
Merged

Add example scripts for README quick start #15

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8 changes: 8 additions & 0 deletions src/example.sh
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Original file line number Diff line number Diff line change
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#!/bin/bash

cap_data_download \
"https://raw.githubusercontent.com/nf-core/test-datasets/rnaseq/samplesheet/samplesheet.csv"

cap_data_download \
--unzip \
"https://ftp.ensembl.org/pub/release-110/fasta/homo_sapiens/dna/Homo_sapiens.GRCh38.dna.chromosome.MT.fa.gz"
2 changes: 2 additions & 0 deletions verifications/example.out
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91bd5b959db49ecbc2fdfa4b662b3e87 data/Homo_sapiens.GRCh38.dna.chromosome.MT.fa
9ed3466696e00d0bfab09f8c72159c89 data/samplesheet.csv
3 changes: 3 additions & 0 deletions verifications/example.sh
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#!/bin/bash

cap_verify_md5 "data"
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